myRT

myRT report for GCA_001033375.1_Kleb_pneu_CHS237_V1

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Seq: KQ089202.1 Klebsiella pneumoniae strain CHS237 genomic scaffold aeurv-supercont1.7, whole genome shotgun sequence (162493 bp)
Overview 1 RT 1: 82251-87245 bp Neighborhood of RT #1 [82251, 87247] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82251-83522 bp Feature: domain Description: umuC Location: 82254-83517 bp Feature: domain Description: umuC Location: 82254-8351 7 bp Feature: gene Location: 83522-83947 bp Feature: domain Description: PRK10276 Location: 83525-83933 bp Feature: domain Description: PRK1 0276 Location: 83525-83933 bp Feature: gene Location: 84350-85837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84755-85445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84755-85445 bp Feature: gene Location: 86071-86301 bp Feature: gene Location: 86822-87247 bp Feature: domain Description: Antirestrict Location: 86957-87245 bp Feature: domain Description: Antirestrict Location: 86957-87245 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089197.1 Klebsiella pneumoniae strain CHS237 genomic scaffold aeurv-supercont1.2, whole genome shotgun sequence (1438100 bp)
Overview 1 RT 1: 883246-889729 bp Neighborhood of RT #1 [883246, 889731] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883246-884304 bp Feature: domain Description: YccC Location: 883252-884290 bp Feature: domain Description: YccC Location: 8832 52 -8842 90 bp Feature: gene Location: 884403-884876 bp Feature: domain Description: PRK10016 Location: 884406-884865 bp Feature: domain Description: PRK10016 Location: 884406-884865 bp Feature: gene Location: 884958-886445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885363-886053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885363-886053 bp Feature: gene Location: 886963-888126 bp Feature: domain Description: dacD Location: 886966-888121 bp Feature: domain Description: dacD Location: 886966-88812 1 bp Feature: gene Location: 888307-889731 bp Feature: domain Description: SbcB Location: 888313-889729 bp Feature: domain Description: SbcB Location: 888313-88972 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ089206.1 Klebsiella pneumoniae strain CHS237 genomic scaffold aeurv-supercont1.11, whole genome shotgun sequence (73511 bp)
Overview 1 RT 1: 19362-24715 bp Neighborhood of RT #1 [19362, 24852] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 19362-20633 bp Feature: domain Description: umuC Location: 19365-20625 bp Feature: domain Description: umuC Location: 193 65-20625 bp Feature: gene Location: 20633-21064 bp Feature: domain Description: PRK10276 Location: 20684-21047 bp Feature: domain Description: PRK10276 Location: 20684-21047 bp Feature: gene Location: 21147-22634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21552-22242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21552-22242 bp Feature: gene Location: 23207-24178 bp Feature: domain Description: StbA Location: 23210-24155 bp Feature: domain Description: StbA Location: 23 210-24155 bp Feature: gene Location: 24181-24852 bp Feature: domain Description: Plasmid_stab_B Location: 24196-24403 bp Feature: domain Description: Plasmid_stab_B Location: 24196-24403 bp Feature: domain Description: Plasmid_stab_B Location: 24508-24715 bp Feature: domain Description: Plasmid_stab_B Location: 24508-24715 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ089196.1 Klebsiella pneumoniae strain CHS237 genomic scaffold aeurv-supercont1.1, whole genome shotgun sequence (1719617 bp)
Overview 1 RT 1: 265416-268823 bp 2 RT 2: 708066-713671 bp 3 RT 3: 1051351-1056769 bp 4 RT 4: 1234878-1240743 bp Neighborhood of RT #1 [265416, 268924] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [708066, 713697] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1051351, 1056771] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1234878, 1240745] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 265416-266147 bp Feature: domain Description: Laminin_G_3 Location: 265737-266091 bp Feature: domain Description: Laminin_G_3 Location: 265737-266091 bp Feature: gene Location: 266144-266353 bp Feature: gene Location: 266803-268290 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267208-267898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 267208-267898 bp Feature: gene Location: 268368-268607 bp Feature: gene Location: 268607-268924 bp Feature: domain Description: PRK10276 Location: 268613-268727 bp Feature: domain Description: PRK10276 Location: 268613-268727 bp Feature: domain Description: PRK10276 Location: 268754-268823 bp Feature: domain Description: PRK10276 Location: 268754 -268823 bp Feature: gene Location: 708066-708629 bp Feature: domain Description: YbjK Location: 708072-708609 bp Feature: domain Description: YbjK Location: 708072-708609 bp Feature: gene Location: 708752-709804 bp Feature: domain Description: int Location: 708755-709754 bp Feature: domain Description: int Location: 708755-709754 bp Feature: gene Location: 710220-711707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 710625-711315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 710625-711315 bp Feature: gene Location: 711806-712750 bp Feature: gene Location: 712762-713697 bp Feature: domain Description: Phage_CI_repr Location: 712846-713029 bp Feature: domain Description: Phage_CI_repr Location: 71284 6-713029 bp Feature: domain Description: Phage_CI_repr Location: 713158-713350 bp Feature: domain Description: Phage_CI_repr Location: 713158-713350 bp Feature: domain Description: Phage_CI_C Location: 713377-713671 bp Feature: domain Description: Phage_CI_C Location: 713377-713671 bp Feature: gene Location: 1051351-1052490 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1051534-1052434 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1051534 -10524 34 bp Feature: gene Location: 1052661-1052903 bp Feature: domain Description: DinI Location: 1052712-1052892 bp Feature: domain Description: DinI Location: 1052712-1052892 bp Feature: gene Location: 1053518-1055005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053923-1054613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1053923-1054 613 bp Feature: gene Location: 1055084-1055503 bp Feature: domain Description: PRK10276 Location: 1055087-1055498 bp Feature: domain Description: PRK10276 Location: 1055087-10554 98 bp Feature: gene Location: 1055506-1056771 bp Feature: domain Description: umuC Location: 1055509-1056769 bp Feature: domain Description: umuC Location: 1055509-1056769 bp Feature: gene Location: 1234878-1235582 bp Feature: domain Description: Rve Location: 1234881-1235526 bp Feature: domain Description: Rve Location: 1234 881-1235526 bp Feature: gene Location: 1235648-1236097 bp Feature: domain Description: PinE Location: 1235657-1236089 bp Feature: domain Description: PinE Location: 1235657-1236089 bp Feature: gene Location: 1237492-1238979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1237897-1238587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1237897-1238587 bp Feature: gene Location: 1238972-1239478 bp Feature: domain Description: PRK10276 Location: 1239062-1239473 bp Feature: domain Description: PRK10276 Location: 1239062-12394 73 bp Feature: gene Location: 1239480-1240745 bp Feature: domain Description: umuC Location: 1239483-1240743 bp Feature: domain Description: umuC Location: 12394 83-124 074 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)