myRT

myRT report for GCA_001033385.1_Kleb_pneu_BWH53_V1

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Seq: KQ089219.1 Klebsiella pneumoniae strain BWH53 genomic scaffold aeurA-supercont1.9, whole genome shotgun sequence (48926 bp)
Overview 1 RT 1: 853-4260 bp Neighborhood of RT #1 [853, 4361] Laminin_G_3 RVT-GII PRK10276 PRK10276 Feature: gene Location: 853-1584 bp Feature: domain Description: Laminin_G_3 Location: 1174-1528 bp Feature: domain Description: Laminin_G_3 Location: 1 1 74-1 528 bp Feature: gene Location: 1581-1790 bp Feature: gene Location: 2240-3727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2645-3335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2645-3335 bp Feature: gene Location: 3805-4044 bp Feature: gene Location: 4044-4361 bp Feature: domain Description: PRK10276 Location: 4050-4164 bp Feature: domain Description: PRK1 0276 Location: 4050-41 64 bp Feature: domain Description: PRK10276 Location: 4191-4260 bp Feature: domain Description: PRK1 0276 Location: 41 91 -4260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Laminin_G_3 (pfam13385)

Seq: KQ089211.1 Klebsiella pneumoniae strain BWH53 genomic scaffold aeurA-supercont1.1, whole genome shotgun sequence (2727603 bp)
Overview 1 RT 1: 814431-820914 bp 2 RT 2: 1427075-1432736 bp Neighborhood of RT #1 [814431, 820916] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #2 [1427075, 1432813] DinI RVT-GII Phage_GPA dam Feature: gene Location: 814431-815489 bp Feature: domain Description: YccC Location: 814437-815475 bp Feature: domain Description: YccC Location: 814437-815475 bp Feature: gene Location: 815588-816061 bp Feature: domain Description: PRK10016 Location: 815591-816050 bp Feature: domain Description: PRK10016 Location: 815591-816050 bp Feature: gene Location: 816143-817630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816548-817238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 816548-8172 38 bp Feature: gene Location: 818148-819311 bp Feature: domain Description: dacD Location: 818151-819306 bp Feature: domain Description: dacD Location: 818151-819306 bp Feature: gene Location: 819492-820916 bp Feature: domain Description: SbcB Location: 819498-820914 bp Feature: domain Description: SbcB Location: 819498-82 0914 bp Feature: gene Location: 1427075-1427308 bp Feature: domain Description: DinI Location: 1427120-1427303 bp Feature: domain Description: DinI Location: 142 712 0-142 7303 bp Feature: gene Location: 1427320-1427508 bp Feature: gene Location: 1427616-1429103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1428021-1428711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 142 802 1-142 8711 bp Feature: gene Location: 1429581-1431965 bp Feature: domain Description: Phage_GPA Location: 1430145-1431111 bp Feature: domain Description: Phage_GPA Location: 1430145-1431111 bp Feature: gene Location: 1431962-1432813 bp Feature: domain Description: dam Location: 1431965-1432736 bp Feature: domain Description: dam Location: 1431965-1432 736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925), DinI (pfam06183), Phage_GPA (pfam05840), dam (TIGR00571)

Seq: KQ089212.1 Klebsiella pneumoniae strain BWH53 genomic scaffold aeurA-supercont1.2, whole genome shotgun sequence (1969068 bp)
Overview 1 RT 1: 879086-884691 bp 2 RT 2: 1223256-1228674 bp 3 RT 3: 1400872-1406737 bp Neighborhood of RT #1 [879086, 884717] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1223256, 1228676] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1400872, 1406739] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 879086-879649 bp Feature: domain Description: YbjK Location: 879092-879629 bp Feature: domain Description: YbjK Location: 879092-879629 bp Feature: gene Location: 879772-880824 bp Feature: domain Description: int Location: 879775-880774 bp Feature: domain Description: int Location: 879775-880774 bp Feature: gene Location: 881240-882727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881645-882335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 881645-8823 3 5 bp Feature: gene Location: 882826-883770 bp Feature: gene Location: 883782-884717 bp Feature: domain Description: Phage_CI_repr Location: 883866-884049 bp Feature: domain Description: Phage_CI_repr Location: 883 866-884049 bp Feature: domain Description: Phage_CI_repr Location: 884178-884370 bp Feature: domain Description: Phage_CI_repr Location: 884178-8843 70 bp Feature: domain Description: Phage_CI_C Location: 884397-884691 bp Feature: domain Description: Phage_CI_C Location: 8843 97-884691 bp Feature: gene Location: 1223256-1224395 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1223439-1224339 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1223 43 9-12243 3 9 bp Feature: gene Location: 1224566-1224808 bp Feature: domain Description: DinI Location: 1224617-1224797 bp Feature: domain Description: DinI Location: 1224617-1224797 bp Feature: gene Location: 1225423-1226910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1225828-1226518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1225828-1226518 bp Feature: gene Location: 1226989-1227408 bp Feature: domain Description: PRK10276 Location: 1226992-1227403 bp Feature: domain Description: PRK10276 Location: 1226992-1227403 bp Feature: gene Location: 1227411-1228676 bp Feature: domain Description: umuC Location: 1227414-1228674 bp Feature: domain Description: umuC Location: 1227414-1228674 bp Feature: gene Location: 1400872-1401576 bp Feature: domain Description: Rve Location: 1400875-1401520 bp Feature: domain Description: Rve Location: 1400875-1401520 bp Feature: gene Location: 1401642-1402091 bp Feature: domain Description: PinE Location: 1401651-1402083 bp Feature: domain Description: PinE Location: 1401651-1402083 bp Feature: gene Location: 1403486-1404973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1403891-1404581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1403 891-1404581 bp Feature: gene Location: 1404966-1405472 bp Feature: domain Description: PRK10276 Location: 1405056-1405467 bp Feature: domain Description: PRK10276 Location: 1405056-1405467 bp Feature: gene Location: 1405474-1406739 bp Feature: domain Description: umuC Location: 1405477-1406737 bp Feature: domain Description: umuC Location: 1405477-140673 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316)
PinE (COG1961)

Seq: KQ089214.1 Klebsiella pneumoniae strain BWH53 genomic scaffold aeurA-supercont1.4, whole genome shotgun sequence (206139 bp)
Overview 1 RT 1: 65428-72013 bp 2 RT 2: 149922-154935 bp Neighborhood of RT #1 [65428, 72021] cas7_csf2 RVT-GII PRK10276 umuC Neighborhood of RT #2 [149922, 154935] HHA RVT-GII INT_Cre_C Feature: gene Location: 65428-66135 bp Feature: gene Location: 66140-67171 bp Feature: domain Description: cas7_csf2 Location: 66188-67106 bp Feature: domain Description: cas7_csf2 Location: 66188-67106 bp Feature: gene Location: 68755-70242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69160-69850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69160-69850 bp Feature: gene Location: 70328-70750 bp Feature: domain Description: PRK10276 Location: 70334-70736 bp Feature: domain Description: PRK10276 Location: 70334 -70736 bp Feature: gene Location: 70750-72021 bp Feature: domain Description: umuC Location: 70753-72013 bp Feature: domain Description: umuC Location: 70753-72013 bp Feature: gene Location: 149922-150989 bp Feature: gene Location: 151075-151329 bp Feature: domain Description: HHA Location: 151126-151309 bp Feature: domain Description: HHA Location: 151126-151309 bp Feature: gene Location: 151843-153330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152248-152938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15224 8-152938 bp Feature: gene Location: 153416-154552 bp Feature: domain Description: INT_Cre_C Location: 153839-154493 bp Feature: domain Description: INT_Cre_C Location: 153839-154 4 93 bp Feature: gene Location: 154618-154935 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cas7_csf2 (TIGR03115), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), HHA (pfam05321), INT_Cre_C (cd00799)