myRT

myRT report for GCA_001033505.1_Kleb_pneu_MGH84_V1

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Seq: KQ089360.1 Klebsiella pneumoniae strain MGH84 genomic scaffold aeusc-supercont1.1, whole genome shotgun sequence (5319995 bp)
Overview 1 RT 1: 305608-314792 bp 2 RT 2: 1509734-1515038 bp 3 RT 3: 3735049-3740747 bp Neighborhood of RT #1 [305608, 314806] AcoA MalT RVT-UG8 RVT-UG3 INT_P4_C PRK09692 Neighborhood of RT #2 [1509734, 1515040] PRK10276 umuC RVT-UG11 PRK09951 PRK15110 Neighborhood of RT #3 [3735049, 3740747] TraD PRK13889 RVT-Retrons Feature: gene Location: 305608-306567 bp Ori: KMG75635.1 Feature: domain Description: AcoA Location: 305614-306562 bp Feature: domain Description: AcoA Location: 30561 4-306562 bp Feature: gene Location: 306821-309586 bp Ori: KMG75636.1 Feature: domain Description: MalT Location: 306896-309581 bp Feature: domain Description: MalT Location: 306896-309581 bp Feature: gene Location: 310217-312178 bp Ori: KMG75637.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 310736-311183 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 31 0736-31 1 1 83 bp Feature: gene Location: 312175-313458 bp Ori: KMG75638.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 312463-312970 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 31 2463-31 2970 bp Feature: gene Location: 313637-314302 bp Ori: KMG75639.1 Feature: domain Description: INT_P4_C Location: 313745-314276 bp Feature: domain Description: INT_P4_C Location: 31 3745-31 4276 bp Feature: gene Location: 314315-314806 bp Ori: KMG75640.1 Feature: domain Description: PRK09692 Location: 314321-314792 bp Feature: domain Description: PRK09692 Location: 31 4321 -31 4792 bp Feature: gene Location: 1509734-1510153 bp Ori: KMG71807.1 Feature: domain Description: PRK10276 Location: 1509737-1510148 bp Feature: domain Description: PRK1 0276 Location: 1 509737-1 51 01 48 bp Feature: gene Location: 1510155-1511420 bp Ori: KMG71808.1 Feature: domain Description: umuC Location: 1510158-1511418 bp Feature: domain Description: umuC Location: 1 51 01 58-1 51 1 41 8 bp Feature: gene Location: 1512093-1513001 bp Ori: KMG71809.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 1512366-1512822 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 51 2366-1 51 2822 bp Feature: gene Location: 1513202-1513870 bp Ori: KMG71810.1 Feature: domain Description: PRK09951 Location: 1513205-1513868 bp Feature: domain Description: PRK09951 Location: 1 51 3205-1 51 3868 bp Feature: gene Location: 1514075-1515040 bp Ori: KMG71811.1 Feature: domain Description: PRK15110 Location: 1514078-1515038 bp Feature: domain Description: PRK1 51 1 0 Location: 1 51 4078-1 51 5038 bp Feature: gene Location: 3735049-3735360 bp Ori: KMG67495.1 Feature: domain Description: TraD Location: 3735163-3735337 bp Feature: domain Description: TraD Location: 37351 63-3735337 bp Feature: gene Location: 3736197-3737699 bp Ori: KMG67496.1 Feature: domain Description: PRK13889 Location: 3736200-3736782 bp Feature: domain Description: PRK1 3889 Location: 3736200-3736782 bp Feature: gene Location: 3737776-3738876 bp Ori: KMG67497.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3737917-3738469 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 373791 7-3738469 bp Feature: gene Location: 3739241-3739456 bp Feature: gene Location: 3740196-3740747 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcoA (COG1071), MalT (COG2909), RVT-UG8, RVT-UG3, INT_P4_C (cd00801), PRK09692 (Integrase; provisional), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-UG11, PRK09951 (hypothetical protein; Provisional)
PRK15110 (peptide ABC transporter permease SapB), TraD (pfam06412), PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons