myRT

myRT report for GCA_001033535.1_Kleb_pneu_MGH90_V1

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Seq: KQ089372.1 Klebsiella pneumoniae strain MGH90 genomic scaffold aeusA-supercont1.1, whole genome shotgun sequence (5152205 bp)
Overview 1 RT 1: 297672-304190 bp 2 RT 2: 4268711-4273682 bp Neighborhood of RT #1 [297672, 304225] McrA Pox_D5 RVT-Retrons INT_P4_C proA Neighborhood of RT #2 [4268711, 4273687] PRK09692 PRK09692 SLATT_5 RVT-UG17 Psu PRK00872 Feature: gene Location: 297672-298505 bp Ori: KMG82855.1 Feature: domain Description: McrA Location: 297795-298434 bp Feature: domain Description: McrA Location: 297795-298434 bp Feature: gene Location: 298746-299027 bp Ori: KMG82856.1 Feature: domain Description: Pox_D5 Location: 298821-299001 bp Feature: domain Description: Pox_D5 Location: 298821 -299001 bp Feature: gene Location: 299070-300566 bp Ori: KMG82857.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 299775-300330 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 299775-300330 bp Feature: gene Location: 301456-302202 bp Ori: KMG82858.1 Feature: domain Description: INT_P4_C Location: 301672-302191 bp Feature: domain Description: INT_P4_C Location: 301 672-3021 91 bp Feature: gene Location: 302972-304225 bp Ori: KMG82859.1 Feature: domain Description: proA Location: 302999-304190 bp Feature: domain Description: proA Location: 302999-3041 90 bp Feature: gene Location: 4268711-4269505 bp Ori: KMG79897.1 Feature: domain Description: PRK09692 Location: 4268720-4269083 bp Feature: domain Description: PRK09692 Location: 4268720-4269083 bp Feature: domain Description: PRK09692 Location: 4269101-4269476 bp Feature: domain Description: PRK09692 Location: 42691 01 -4269476 bp Feature: gene Location: 4269737-4270378 bp Ori: KMG79898.1 Feature: domain Description: SLATT_5 Location: 4269740-4270343 bp Feature: domain Description: SLATT_5 Location: 4269740-4270343 bp Feature: gene Location: 4270573-4271982 bp Ori: KMG79899.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4270810-4271422 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 427081 0-4271 422 bp Feature: gene Location: 4272679-4272858 bp Ori: KMG79900.1 Feature: domain Description: Psu Location: 4272697-4272856 bp Feature: domain Description: Psu Location: 4272697-4272856 bp Feature: gene Location: 4273220-4273687 bp Ori: KMG79901.1 Feature: domain Description: PRK00872 Location: 4273226-4273682 bp Feature: domain Description: PRK00872 Location: 4273226-4273682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT McrA (COG4058), Pox_D5 (pfam03288), RVT-Retrons, INT_P4_C (cd00801), proA (TIGR00407), PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK00872 (hypothetical protein; Provisional)

Seq: KQ089374.1 Klebsiella pneumoniae strain MGH90 genomic scaffold aeusA-supercont1.3, whole genome shotgun sequence (129056 bp)
Overview 1 RT 1: 111182-116535 bp Neighborhood of RT #1 [111182, 116672] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 111182-112453 bp Ori: KMG76678.1 Feature: domain Description: umuC Location: 111185-112445 bp Feature: domain Description: umuC Location: 111185-112 445 bp Feature: gene Location: 112453-112884 bp Ori: KMG76679.1 Feature: domain Description: PRK10276 Location: 112504-112867 bp Feature: domain Description: PRK102 76 Location: 112 504-112 867 bp Feature: gene Location: 113369-114778 bp Ori: KMG76680.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113696-114386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113696-114386 bp Feature: gene Location: 115027-115998 bp Ori: KMG76681.1 Feature: domain Description: StbA Location: 115030-115975 bp Feature: domain Description: StbA Location: 115030-115975 bp Feature: gene Location: 116001-116672 bp Ori: KMG76682.1 Feature: domain Description: Plasmid_stab_B Location: 116016-116223 bp Feature: domain Description: Plasmid_stab_B Location: 116016-1162 2 3 bp Feature: domain Description: Plasmid_stab_B Location: 116328-116535 bp Feature: domain Description: Plasmid_stab_B Location: 11632 8-116535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)