myRT

myRT report for GCA_001033565.1_Kleb_pneu_MGH91_V1

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Seq: KQ089380.1 Klebsiella pneumoniae strain MGH91 genomic scaffold aeusz-supercont1.1, whole genome shotgun sequence (4700870 bp)
Overview 1 RT 1: 582545-585952 bp 2 RT 2: 1023896-1029501 bp 3 RT 3: 1366428-1371846 bp 4 RT 4: 2723962-2730445 bp Neighborhood of RT #1 [582545, 586053] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1023896, 1029527] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1366428, 1371848] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2723962, 2730447] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 582545-583276 bp Feature: domain Description: Laminin_G_3 Location: 582866-583220 bp Feature: domain Description: Laminin_G_3 Location: 582866-583220 bp Feature: gene Location: 583273-583482 bp Feature: gene Location: 583932-585419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584337-585027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584337-585027 bp Feature: gene Location: 585497-585736 bp Feature: gene Location: 585736-586053 bp Feature: domain Description: PRK10276 Location: 585742-585856 bp Feature: domain Description: PRK1 0276 Location: 585742-585856 bp Feature: domain Description: PRK10276 Location: 585883-585952 bp Feature: domain Description: PRK1 0276 Location: 585883-585952 bp Feature: gene Location: 1023896-1024459 bp Feature: domain Description: YbjK Location: 1023902-1024439 bp Feature: domain Description: YbjK Location: 1 023902-1 024439 bp Feature: gene Location: 1024582-1025634 bp Feature: domain Description: int Location: 1024585-1025584 bp Feature: domain Description: int Location: 1 024585-1 025584 bp Feature: gene Location: 1026050-1027537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026455-1027145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 026455-1 0271 45 bp Feature: gene Location: 1027636-1028580 bp Feature: gene Location: 1028592-1029527 bp Feature: domain Description: Phage_CI_repr Location: 1028676-1028859 bp Feature: domain Description: Phage_CI_repr Location: 1 028676-1 028859 bp Feature: domain Description: Phage_CI_repr Location: 1028988-1029180 bp Feature: domain Description: Phage_CI_repr Location: 1 028988-1 0291 80 bp Feature: domain Description: Phage_CI_C Location: 1029207-1029501 bp Feature: domain Description: Phage_CI_C Location: 1 029207-1 029501 bp Feature: gene Location: 1366428-1367567 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1366611-1367511 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 36661 1 -1 36751 1 bp Feature: gene Location: 1367738-1367980 bp Feature: domain Description: DinI Location: 1367789-1367969 bp Feature: domain Description: DinI Location: 1 367789-1 367969 bp Feature: gene Location: 1368595-1370082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1369000-1369690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 369000-1 369690 bp Feature: gene Location: 1370161-1370580 bp Feature: domain Description: PRK10276 Location: 1370164-1370575 bp Feature: domain Description: PRK1 0276 Location: 1 3701 64-1 370575 bp Feature: gene Location: 1370583-1371848 bp Feature: domain Description: umuC Location: 1370586-1371846 bp Feature: domain Description: umuC Location: 1 370586-1 371 846 bp Feature: gene Location: 2723962-2725020 bp Feature: domain Description: YccC Location: 2723968-2725006 bp Feature: domain Description: YccC Location: 2723968-2725006 bp Feature: gene Location: 2725119-2725592 bp Feature: domain Description: PRK10016 Location: 2725122-2725581 bp Feature: domain Description: PRK1 001 6 Location: 27251 22-2725581 bp Feature: gene Location: 2725674-2727161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2726079-2726769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2726079-2726769 bp Feature: gene Location: 2727679-2728842 bp Feature: domain Description: dacD Location: 2727682-2728837 bp Feature: domain Description: dacD Location: 2727682-2728837 bp Feature: gene Location: 2729023-2730447 bp Feature: domain Description: SbcB Location: 2729029-2730445 bp Feature: domain Description: SbcB Location: 2729029-2730445 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ089382.1 Klebsiella pneumoniae strain MGH91 genomic scaffold aeusz-supercont1.3, whole genome shotgun sequence (198416 bp)
Overview 1 RT 1: 139145-144427 bp Neighborhood of RT #1 [139145, 144660] umuC PRK10276 RVT-GII Zn_Tnp_IS91 Y2_Tnp Feature: gene Location: 139145-140416 bp Feature: domain Description: umuC Location: 139148-140411 bp Feature: domain Description: umuC Location: 139148-140411 bp Feature: gene Location: 140416-140841 bp Feature: domain Description: PRK10276 Location: 140419-140827 bp Feature: domain Description: PRK102 76 Location: 140419-14082 7 bp Feature: gene Location: 141244-142731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141649-142339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141649-142 339 bp Feature: gene Location: 142965-143195 bp Feature: gene Location: 143461-144660 bp Feature: domain Description: Zn_Tnp_IS91 Location: 143512-143779 bp Feature: domain Description: Zn_Tnp_IS91 Location: 143512 -143779 bp Feature: domain Description: Y2_Tnp Location: 143893-144427 bp Feature: domain Description: Y2 _Tnp Location: 143893-14442 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986)

Seq: KQ089385.1 Klebsiella pneumoniae strain MGH91 genomic scaffold aeusz-supercont1.6, whole genome shotgun sequence (52997 bp)
Overview 1 RT 1: 22072-26514 bp Neighborhood of RT #1 [22072, 26516] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 22072-23343 bp Feature: domain Description: umuC Location: 22075-23335 bp Feature: domain Description: umuC Location: 22075-23 3 3 5 bp Feature: gene Location: 23343-23774 bp Feature: domain Description: PRK10276 Location: 23394-23757 bp Feature: domain Description: PRK10276 Location: 23 3 94-23 757 bp Feature: gene Location: 24180-25667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24585-25275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24585-25275 bp Feature: gene Location: 25819-26094 bp Feature: domain Description: InsA Location: 25825-26086 bp Feature: domain Description: InsA Location: 25825-26086 bp Feature: gene Location: 26139-26516 bp Feature: domain Description: DDE_Tnp_IS1 Location: 26142-26514 bp Feature: domain Description: DDE_Tnp_IS1 Location: 26142-26514 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)