myRT

myRT report for GCA_001033725.1_Kleb_pneu_MGH101_V1

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Seq: KQ089467.1 Klebsiella pneumoniae strain MGH101 genomic scaffold aeurZ-supercont1.3, whole genome shotgun sequence (69726 bp)
Overview 1 RT 1: 59150-65091 bp Neighborhood of RT #1 [59150, 65091] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 59150-60421 bp Ori: KMH23205.1 Feature: domain Description: umuC Location: 59153-60413 bp Feature: domain Description: umuC Location: 591 53-6041 3 bp Feature: gene Location: 60421-60852 bp Ori: KMH23206.1 Feature: domain Description: PRK10276 Location: 60472-60835 bp Feature: domain Description: PRK1 0276 Location: 60472-60835 bp Feature: gene Location: 61261-62745 bp Ori: KMH23207.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61663-62353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 663-62353 bp Feature: gene Location: 63215-64180 bp Ori: KMH23208.1 Feature: domain Description: ArdC Location: 63341-64175 bp Feature: domain Description: ArdC Location: 63341 -641 75 bp Feature: gene Location: 64660-65091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: KQ089466.1 Klebsiella pneumoniae strain MGH101 genomic scaffold aeurZ-supercont1.2, whole genome shotgun sequence (81690 bp)
Overview 1 RT 1: 1347-6699 bp Neighborhood of RT #1 [1347, 6836] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 1347-2618 bp Ori: KMH23359.1 Feature: domain Description: umuC Location: 1350-2610 bp Feature: domain Description: umuC Location: 1350-2 610 bp Feature: gene Location: 2618-3049 bp Ori: KMH23360.1 Feature: domain Description: PRK10276 Location: 2666-3032 bp Feature: domain Description: PRK102 76 Location: 2 666-3032 bp Feature: gene Location: 3968-4942 bp Ori: KMH23361.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3977-4550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3977-4550 bp Feature: gene Location: 5191-6162 bp Ori: KMH23362.1 Feature: domain Description: StbA Location: 5194-6139 bp Feature: domain Description: StbA Location: 5194-6139 bp Feature: gene Location: 6165-6836 bp Ori: KMH23363.1 Feature: domain Description: Plasmid_stab_B Location: 6180-6387 bp Feature: domain Description: Plasmid_stab_B Location: 6180-6387 bp Feature: domain Description: Plasmid_stab_B Location: 6492-6699 bp Feature: domain Description: Plasmid_stab_B Location: 6492 -6699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ089468.1 Klebsiella pneumoniae strain MGH101 genomic scaffold aeurZ-supercont1.4, whole genome shotgun sequence (19786 bp)
Overview 1 RT 1: 14048-19400 bp Neighborhood of RT #1 [14048, 19537] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 14048-15319 bp Ori: KMH23190.1 Feature: domain Description: umuC Location: 14051-15311 bp Feature: domain Description: umuC Location: 14051-153 11 bp Feature: gene Location: 15319-15750 bp Ori: KMH23191.1 Feature: domain Description: PRK10276 Location: 15367-15733 bp Feature: domain Description: PRK10276 Location: 153 67-1573 3 bp Feature: gene Location: 16669-17643 bp Ori: KMH23192.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16678-17251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16678-17251 bp Feature: gene Location: 17892-18863 bp Ori: KMH23193.1 Feature: domain Description: StbA Location: 17895-18840 bp Feature: domain Description: StbA Location: 17895-18840 bp Feature: gene Location: 18866-19537 bp Ori: KMH23194.1 Feature: domain Description: Plasmid_stab_B Location: 18881-19088 bp Feature: domain Description: Plasmid_stab_B Location: 18881-19088 bp Feature: domain Description: Plasmid_stab_B Location: 19193-19400 bp Feature: domain Description: Plasmid_stab_B Location: 19193 -19400 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ089465.1 Klebsiella pneumoniae strain MGH101 genomic scaffold aeurZ-supercont1.1, whole genome shotgun sequence (5319103 bp)
Overview 1 RT 1: 3761914-3766761 bp Neighborhood of RT #1 [3761914, 3766778] InsA DDE_Tnp_IS1 RVT-UG4 FimD FimC Feature: gene Location: 3761914-3762189 bp Ori: KMH25879.1 Feature: domain Description: InsA Location: 3761920-3762184 bp Feature: domain Description: InsA Location: 3761920-3762184 bp Feature: gene Location: 3762234-3762611 bp Ori: KMH25880.1 Feature: domain Description: DDE_Tnp_IS1 Location: 3762237-3762609 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3762237-3762609 bp Feature: gene Location: 3762546-3763376 bp Ori: KMH25881.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3762957-3763299 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3762957-3763299 bp Feature: gene Location: 3763373-3765967 bp Ori: KMH25882.1 Feature: domain Description: FimD Location: 3763415-3765956 bp Feature: domain Description: FimD Location: 37634 15-3765956 bp Feature: gene Location: 3766014-3766778 bp Ori: KMH25883.1 Feature: domain Description: FimC Location: 3766059-3766761 bp Feature: domain Description: FimC Location: 3766059-3766761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), DDE_Tnp_IS1 (pfam03400), RVT-UG4, FimD (COG3188), FimC (COG3121)