myRT

myRT report for GCA_001033755.1_Kleb_pneu_MGH111_V1

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Seq: KQ089482.1 Klebsiella pneumoniae strain MGH111 genomic scaffold aeurO-supercont1.3, whole genome shotgun sequence (219751 bp)
Overview 1 RT 1: 191617-196629 bp Neighborhood of RT #1 [191617, 196629] INT_Cre_C RVT-GII HHA Feature: gene Location: 191617-191934 bp Feature: gene Location: 192000-193136 bp Ori: KMH36947.1 Feature: domain Description: INT_Cre_C Location: 192423-193077 bp Feature: domain Description: INT_Cre_C Location: 1 92423-1 93077 bp Feature: gene Location: 193222-194706 bp Ori: KMH36948.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193624-194314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 93624-1 9431 4 bp Feature: gene Location: 195222-195476 bp Ori: KMH36949.1 Feature: domain Description: HHA Location: 195273-195456 bp Feature: domain Description: HHA Location: 1 95273-1 95456 bp Feature: gene Location: 195562-196629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: KQ089480.1 Klebsiella pneumoniae strain MGH111 genomic scaffold aeurO-supercont1.1, whole genome shotgun sequence (4762023 bp)
Overview 1 RT 1: 1350067-1355484 bp 2 RT 2: 1487083-1492018 bp 3 RT 3: 2682628-2686579 bp 4 RT 4: 3836863-3845448 bp Neighborhood of RT #1 [1350067, 1355486] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [1487083, 1492020] DDE_Tnp_IS1 Q RVT-GII PRK10276 umuC Neighborhood of RT #3 [2682628, 2686579] RVT-GII Neighborhood of RT #4 [3836863, 3845465] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 1350067-1351206 bp Ori: KMH44061.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1350250-1351150 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13502 50-1351150 bp Feature: gene Location: 1351377-1351619 bp Ori: KMH44062.1 Feature: domain Description: DinI Location: 1351428-1351608 bp Feature: domain Description: DinI Location: 135142 8-1351608 bp Feature: gene Location: 1352236-1353720 bp Ori: KMH44063.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1352638-1353328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1352 638-135332 8 bp Feature: gene Location: 1353799-1354218 bp Ori: KMH44064.1 Feature: domain Description: PRK10276 Location: 1353802-1354213 bp Feature: domain Description: PRK102 76 Location: 1353802 -13542 13 bp Feature: gene Location: 1354221-1355486 bp Ori: KMH44065.1 Feature: domain Description: umuC Location: 1354224-1355484 bp Feature: domain Description: umuC Location: 13542 2 4-1355484 bp Feature: gene Location: 1487083-1487460 bp Ori: KMH44197.1 Feature: domain Description: DDE_Tnp_IS1 Location: 1487086-1487458 bp Feature: domain Description: DDE_Tnp_IS1 Location: 1487086-1487458 bp Feature: gene Location: 1487875-1488273 bp Ori: KMH44198.1 Feature: domain Description: Q Location: 1487878-1488265 bp Feature: domain Description: Q Location: 1487878-14882 65 bp Feature: gene Location: 1488771-1490255 bp Ori: KMH44199.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1489173-1489863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1489173-1489863 bp Feature: gene Location: 1490334-1490753 bp Ori: KMH44200.1 Feature: domain Description: PRK10276 Location: 1490337-1490748 bp Feature: domain Description: PRK102 76 Location: 1490337-1490748 bp Feature: gene Location: 1490755-1492020 bp Ori: KMH44201.1 Feature: domain Description: umuC Location: 1490758-1492018 bp Feature: domain Description: umuC Location: 1490758-1492 018 bp Feature: gene Location: 2682628-2683503 bp Feature: gene Location: 2683536-2683640 bp Feature: gene Location: 2683718-2685202 bp Ori: KMH42157.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2684120-2684810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 68412 0-2 684810 bp Feature: gene Location: 2685643-2685816 bp Feature: gene Location: 2685827-2686579 bp Feature: gene Location: 3836863-3837543 bp Ori: KMH41556.1 Feature: domain Description: YqgA Location: 3836866-3837538 bp Feature: domain Description: YqgA Location: 3836866-3837538 bp Feature: gene Location: 3838361-3839224 bp Ori: KMH41557.1 Feature: domain Description: PRK09692 Location: 3838385-3839222 bp Feature: domain Description: PRK09692 Location: 3838385-38392 2 2 bp Feature: gene Location: 3839982-3842063 bp Ori: KMH41558.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3840393-3840837 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3840393-3840837 bp Feature: gene Location: 3842060-3844654 bp Ori: KMH41559.1 Feature: domain Description: FimD Location: 3842102-3844643 bp Feature: domain Description: FimD Location: 3842 102 -3844643 bp Feature: gene Location: 3844701-3845465 bp Ori: KMH41560.1 Feature: domain Description: FimC Location: 3844746-3845448 bp Feature: domain Description: FimC Location: 3844746-3845448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DDE_Tnp_IS1 (pfam03400), Q (PHA02536), YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4
FimD (COG3188), FimC (COG3121)

Seq: KQ089487.1 Klebsiella pneumoniae strain MGH111 genomic scaffold aeurO-supercont1.8, whole genome shotgun sequence (24232 bp)
Overview 1 RT 1: 19372-23814 bp Neighborhood of RT #1 [19372, 23816] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 19372-20643 bp Ori: KMH33790.1 Feature: domain Description: umuC Location: 19375-20635 bp Feature: domain Description: umuC Location: 193 75-2063 5 bp Feature: gene Location: 20643-21074 bp Ori: KMH33791.1 Feature: domain Description: PRK10276 Location: 20694-21057 bp Feature: domain Description: PRK10276 Location: 20694-21057 bp Feature: gene Location: 21483-22967 bp Ori: KMH33792.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21885-22575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21885-22575 bp Feature: gene Location: 23119-23394 bp Ori: KMH33793.1 Feature: domain Description: InsA Location: 23125-23386 bp Feature: domain Description: InsA Location: 23 125-23 3 86 bp Feature: gene Location: 23439-23816 bp Ori: KMH33794.1 Feature: domain Description: DDE_Tnp_IS1 Location: 23442-23814 bp Feature: domain Description: DDE_Tnp_IS1 Location: 23 442-23 814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)