myRT

myRT report for GCA_001033805.1_Kleb_pneu_MGH113_V1

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Seq: KQ089500.1 Klebsiella quasipneumoniae strain MGH113 genomic scaffold aeurF-supercont1.6, whole genome shotgun sequence (352143 bp)
Overview 1 RT 1: 301705-308971 bp Neighborhood of RT #1 [301705, 309012] beta_CA_cladeA SLATT_5 RVT-UG17 INT_RitB_C_like PRK09692 Feature: gene Location: 301705-302379 bp Ori: KMH46515.1 Feature: domain Description: beta_CA_cladeA Location: 301738-302344 bp Feature: domain Description: beta_CA_cladeA Location: 301 738-302344 bp Feature: gene Location: 303611-304150 bp Ori: KMH46516.1 Feature: domain Description: SLATT_5 Location: 303617-304130 bp Feature: domain Description: SLATT_5 Location: 30361 7-3041 30 bp Feature: gene Location: 304140-305510 bp Ori: KMH46517.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 304368-304974 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 304368-304974 bp Feature: gene Location: 306625-307527 bp Ori: KMH46518.1 Feature: domain Description: INT_RitB_C_like Location: 307390-307522 bp Feature: domain Description: INT_RitB_C_like Location: 307390-307522 bp Feature: gene Location: 307741-309012 bp Ori: KMH46519.1 Feature: domain Description: PRK09692 Location: 307819-308971 bp Feature: domain Description: PRK09692 Location: 30781 9-308971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT beta_CA_cladeA (cd00883), SLATT_5 (pfam18160), RVT-UG17, INT_RitB_C_like (cd00797), PRK09692 (Integrase; provisional)

Seq: KQ089495.1 Klebsiella quasipneumoniae strain MGH113 genomic scaffold aeurF-supercont1.1, whole genome shotgun sequence (1678278 bp)
Overview 1 RT 1: 1078047-1082814 bp Neighborhood of RT #1 [1078047, 1082819] PRK10276 umuC RVT-Retrons InsA Feature: gene Location: 1078047-1078466 bp Ori: KMH50784.1 Feature: domain Description: PRK10276 Location: 1078050-1078461 bp Feature: domain Description: PRK102 76 Location: 1078050-1078461 bp Feature: gene Location: 1078468-1079733 bp Ori: KMH50785.1 Feature: domain Description: umuC Location: 1078471-1079731 bp Feature: domain Description: umuC Location: 1078471-1079731 bp Feature: gene Location: 1080134-1081354 bp Ori: KMH50786.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1080317-1080896 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1080317-1080896 bp Feature: gene Location: 1081351-1082052 bp Feature: gene Location: 1082544-1082819 bp Ori: KMH50788.1 Feature: domain Description: InsA Location: 1082550-1082814 bp Feature: domain Description: InsA Location: 1082 550-1082 814 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-Retrons, InsA (COG3677)

Seq: KQ089505.1 Klebsiella quasipneumoniae strain MGH113 genomic scaffold aeurF-supercont1.11, whole genome shotgun sequence (100360 bp)
Overview 1 RT 1: 2905-8101 bp Neighborhood of RT #1 [2905, 8103] PRK13753 Multi_Drug_Res RVT-GII GIIM IMP_DIM-like_MBL-B1 PRK15417 Feature: gene Location: 2905-3744 bp Ori: KMH44740.1 Feature: domain Description: PRK13753 Location: 2908-3742 bp Feature: domain Description: PRK13 753 Location: 2908-3 742 bp Feature: gene Location: 3738-4085 bp Ori: KMH44741.1 Feature: domain Description: Multi_Drug_Res Location: 3747-4020 bp Feature: domain Description: Multi_Drug_Res Location: 3 747-4020 bp Feature: gene Location: 4758-6107 bp Ori: KMH44742.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5040-5658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5040-5658 bp Feature: domain Description: GIIM Note: maturase Location: 5706-5910 bp Feature: domain Description: GIIM Note: maturase Location: 5706-5910 bp Feature: gene Location: 6197-6937 bp Ori: KMH44743.1 Feature: domain Description: IMP_DIM-like_MBL-B1 Location: 6269-6890 bp Feature: domain Description: IMP_DIM-like_MBL-B1 Location: 6269-6890 bp Feature: gene Location: 7090-8103 bp Ori: KMH44744.1 Feature: domain Description: PRK15417 Location: 7093-8101 bp Feature: domain Description: PRK15417 Location: 7093 -8101 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13753 (dihydropteroate synthase; Provisional), Multi_Drug_Res (pfam00893), RVT-GII, GIIM (pfam08388), IMP_DIM-like_MBL-B1 (cd16301), PRK15417 (integron integrase)