myRT

myRT report for GCA_001033925.1_Kleb_pneu_MGH124_V1

Download annotations/find similar RTs

Seq: KQ089572.1 Klebsiella pneumoniae strain MGH124 genomic scaffold aeurQ-supercont1.3, whole genome shotgun sequence (560240 bp)
Overview 1 RT 1: 467580-476198 bp Neighborhood of RT #1 [467580, 476215] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 467580-468293 bp Ori: KMH83573.1 Feature: domain Description: YqgA Location: 467586-468288 bp Feature: domain Description: YqgA Location: 467586-468288 bp Feature: gene Location: 469111-469974 bp Ori: KMH83574.1 Feature: domain Description: PRK09692 Location: 469135-469972 bp Feature: domain Description: PRK09692 Location: 4691 35-469972 bp Feature: gene Location: 470732-472813 bp Ori: KMH83575.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 471143-471587 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 471 1 43-471 587 bp Feature: gene Location: 472810-475404 bp Ori: KMH83576.1 Feature: domain Description: FimD Location: 472852-475393 bp Feature: domain Description: FimD Location: 472852-475393 bp Feature: gene Location: 475451-476215 bp Ori: KMH83577.1 Feature: domain Description: FimC Location: 475496-476198 bp Feature: domain Description: FimC Location: 475496-4761 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: KQ089573.1 Klebsiella pneumoniae strain MGH124 genomic scaffold aeurQ-supercont1.4, whole genome shotgun sequence (189640 bp)
Overview 1 RT 1: 172182-176976 bp Neighborhood of RT #1 [172182, 176978] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 172182-173231 bp Ori: KMH82061.1 Feature: domain Description: umuC Location: 172185-173181 bp Feature: domain Description: umuC Location: 172 185-173181 bp Feature: gene Location: 173231-173656 bp Ori: KMH82062.1 Feature: domain Description: PRK10276 Location: 173234-173642 bp Feature: domain Description: PRK102 76 Location: 1732 34-173642 bp Feature: gene Location: 174136-175569 bp Ori: KMH82063.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174463-175177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 174463-175177 bp Feature: gene Location: 175803-176033 bp Feature: gene Location: 176553-176978 bp Ori: KMH82065.1 Feature: domain Description: Antirestrict Location: 176688-176976 bp Feature: domain Description: Antirestrict Location: 176688-176976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)