myRT

myRT report for GCA_001033965.1_Kleb_pneu_MGH125_V1

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Seq: KQ089588.1 Klebsiella pneumoniae strain MGH125 genomic scaffold aeusk-supercont1.1, whole genome shotgun sequence (2980173 bp)
Overview 1 RT 1: 650396-656001 bp 2 RT 2: 1041090-1046508 bp 3 RT 3: 2426074-2432557 bp Neighborhood of RT #1 [650396, 656027] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1041090, 1046510] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2426074, 2432559] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 650396-650959 bp Feature: domain Description: YbjK Location: 650402-650939 bp Feature: domain Description: YbjK Location: 650402-650939 bp Feature: gene Location: 651082-652134 bp Feature: domain Description: int Location: 651085-652084 bp Feature: domain Description: int Location: 651 085-652084 bp Feature: gene Location: 652550-654037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 652955-653645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 652955-653645 bp Feature: gene Location: 654136-655080 bp Feature: gene Location: 655092-656027 bp Feature: domain Description: Phage_CI_repr Location: 655176-655359 bp Feature: domain Description: Phage_CI_repr Location: 6551 76-655359 bp Feature: domain Description: Phage_CI_repr Location: 655488-655680 bp Feature: domain Description: Phage_CI_repr Location: 655488-655680 bp Feature: domain Description: Phage_CI_C Location: 655707-656001 bp Feature: domain Description: Phage_CI_C Location: 655707-656001 bp Feature: gene Location: 1041090-1042229 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1041273-1042173 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 041 273-1 0421 73 bp Feature: gene Location: 1042400-1042642 bp Feature: domain Description: DinI Location: 1042451-1042631 bp Feature: domain Description: DinI Location: 1 042451 -1 042631 bp Feature: gene Location: 1043257-1044744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1043662-1044352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 043662-1 044352 bp Feature: gene Location: 1044823-1045242 bp Feature: domain Description: PRK10276 Location: 1044826-1045237 bp Feature: domain Description: PRK1 0276 Location: 1 044826-1 045237 bp Feature: gene Location: 1045245-1046510 bp Feature: domain Description: umuC Location: 1045248-1046508 bp Feature: domain Description: umuC Location: 1 045248-1 046508 bp Feature: gene Location: 2426074-2427132 bp Feature: domain Description: YccC Location: 2426080-2427118 bp Feature: domain Description: YccC Location: 2426080-24271 1 8 bp Feature: gene Location: 2427231-2427704 bp Feature: domain Description: PRK10016 Location: 2427234-2427693 bp Feature: domain Description: PRK1 001 6 Location: 2427234-2427693 bp Feature: gene Location: 2427786-2429273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2428191-2428881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24281 91 -2428881 bp Feature: gene Location: 2429791-2430954 bp Feature: domain Description: dacD Location: 2429794-2430949 bp Feature: domain Description: dacD Location: 2429794-2430949 bp Feature: gene Location: 2431135-2432559 bp Feature: domain Description: SbcB Location: 2431141-2432557 bp Feature: domain Description: SbcB Location: 2431 1 41 -2432557 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ089593.1 Klebsiella pneumoniae strain MGH125 genomic scaffold aeusk-supercont1.6, whole genome shotgun sequence (194060 bp)
Overview 1 RT 1: 152148-157142 bp Neighborhood of RT #1 [152148, 157144] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 152148-153419 bp Feature: domain Description: umuC Location: 152151-153414 bp Feature: domain Description: umuC Location: 152 151-153414 bp Feature: gene Location: 153419-153844 bp Feature: domain Description: PRK10276 Location: 153422-153830 bp Feature: domain Description: PRK102 76 Location: 15342 2 -153830 bp Feature: gene Location: 154247-155734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154652-155342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154652 -155342 bp Feature: gene Location: 155968-156198 bp Feature: gene Location: 156719-157144 bp Feature: domain Description: Antirestrict Location: 156854-157142 bp Feature: domain Description: Antirestrict Location: 156854-157142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)