myRT

myRT report for GCA_001034135.1_Kleb_pneu_BIDMC96_V1

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Seq: KQ089662.1 Klebsiella pneumoniae strain BIDMC96 genomic scaffold aeurB-supercont1.2, whole genome shotgun sequence (223042 bp)
Overview 1 RT 1: 202174-207186 bp Neighborhood of RT #1 [202174, 207186] INT_Cre_C RVT-GII HHA Feature: gene Location: 202174-202491 bp Feature: gene Location: 202557-203693 bp Feature: domain Description: INT_Cre_C Location: 202980-203634 bp Feature: domain Description: INT_Cre_C Location: 202980-203634 bp Feature: gene Location: 203779-205188 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204106-204796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041 06-204796 bp Feature: gene Location: 205779-206033 bp Feature: domain Description: HHA Location: 205830-206013 bp Feature: domain Description: HHA Location: 205830-20601 3 bp Feature: gene Location: 206119-207186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_Cre_C (cd00799), RVT-GII, HHA (pfam05321)

Seq: KQ089661.1 Klebsiella pneumoniae strain BIDMC96 genomic scaffold aeurB-supercont1.1, whole genome shotgun sequence (5316720 bp)
Overview 1 RT 1: 1636662-1641854 bp Neighborhood of RT #1 [1636662, 1641856] PinE group_II_RT_mat RVT-GII PRK10276 umuC Feature: gene Location: 1636662-1637210 bp Feature: domain Description: PinE Location: 1636665-1637202 bp Feature: domain Description: PinE Location: 1636665-16372 02 bp Feature: gene Location: 1638602-1639084 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1638842-1638998 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1638842 -1638998 bp Feature: gene Location: 1639116-1640090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1639125-1639698 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 163912 5-1639698 bp Feature: gene Location: 1640170-1640589 bp Feature: domain Description: PRK10276 Location: 1640173-1640584 bp Feature: domain Description: PRK102 76 Location: 1640173-1640584 bp Feature: gene Location: 1640591-1641856 bp Feature: domain Description: umuC Location: 1640594-1641854 bp Feature: domain Description: umuC Location: 1640594-1641854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), group_II_RT_mat (TIGR04416), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ089663.1 Klebsiella pneumoniae strain BIDMC96 genomic scaffold aeurB-supercont1.3, whole genome shotgun sequence (83694 bp)
Overview 1 RT 1: 1766-7119 bp Neighborhood of RT #1 [1766, 7256] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 1766-3037 bp Feature: domain Description: umuC Location: 1769-3029 bp Feature: domain Description: umuC Location: 1769-3 029 bp Feature: gene Location: 3037-3468 bp Feature: domain Description: PRK10276 Location: 3088-3451 bp Feature: domain Description: PRK10276 Location: 3 088-3 451 bp Feature: gene Location: 3875-5362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4280-4970 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4280-4970 bp Feature: gene Location: 5611-6582 bp Feature: domain Description: StbA Location: 5614-6559 bp Feature: domain Description: StbA Location: 5614-6559 bp Feature: gene Location: 6585-7256 bp Feature: domain Description: Plasmid_stab_B Location: 6600-6807 bp Feature: domain Description: Plasmid_stab_B Location: 6600-6807 bp Feature: domain Description: Plasmid_stab_B Location: 6912-7119 bp Feature: domain Description: Plasmid_stab_B Location: 6912-7119 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)