myRT

myRT report for GCA_001034165.1_Kleb_pneu_UCI75_V1

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Seq: KQ089677.1 Klebsiella pneumoniae strain UCI75 genomic scaffold aeurC-supercont1.5, whole genome shotgun sequence (150437 bp)
Overview 1 RT 1: 91480-96474 bp Neighborhood of RT #1 [91480, 96476] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 91480-92751 bp Feature: domain Description: umuC Location: 91483-92746 bp Feature: domain Description: umuC Location: 91 483-92746 bp Feature: gene Location: 92751-93176 bp Feature: domain Description: PRK10276 Location: 92754-93162 bp Feature: domain Description: PRK1 0276 Location: 92754-931 62 bp Feature: gene Location: 93582-95066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93984-94674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93984-94674 bp Feature: gene Location: 95300-95530 bp Feature: gene Location: 96051-96476 bp Feature: domain Description: Antirestrict Location: 96186-96474 bp Feature: domain Description: Antirestrict Location: 961 86-96474 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089673.1 Klebsiella pneumoniae strain UCI75 genomic scaffold aeurC-supercont1.1, whole genome shotgun sequence (3337552 bp)
Overview 1 RT 1: 585235-588642 bp 2 RT 2: 1027256-1032861 bp 3 RT 3: 1369754-1375172 bp 4 RT 4: 1554669-1560534 bp 5 RT 5: 2185559-2190212 bp 6 RT 6: 2779837-2786320 bp Neighborhood of RT #1 [585235, 588743] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1027256, 1032887] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369754, 1375174] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554669, 1560536] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2185559, 2190214] ALDH_SaliADH MhpC RVT-GII Toxin_GhoT_OrtT YncL Neighborhood of RT #6 [2779837, 2786322] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 585235-585966 bp Feature: domain Description: Laminin_G_3 Location: 585556-585910 bp Feature: domain Description: Laminin_G_3 Location: 585556-585910 bp Feature: gene Location: 585963-586172 bp Feature: gene Location: 586625-588109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 587027-587717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58702 7-587717 bp Feature: gene Location: 588187-588426 bp Feature: gene Location: 588426-588743 bp Feature: domain Description: PRK10276 Location: 588432-588546 bp Feature: domain Description: PRK102 76 Location: 588432 -588546 bp Feature: domain Description: PRK10276 Location: 588573-588642 bp Feature: domain Description: PRK102 76 Location: 588573-588642 bp Feature: gene Location: 1027256-1027819 bp Feature: domain Description: YbjK Location: 1027262-1027799 bp Feature: domain Description: YbjK Location: 102 72 62 -102 7799 bp Feature: gene Location: 1027942-1028994 bp Feature: domain Description: int Location: 1027945-1028944 bp Feature: domain Description: int Location: 102 7945-102 8944 bp Feature: gene Location: 1029413-1030897 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029815-1030505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 9815-1030505 bp Feature: gene Location: 1030996-1031940 bp Feature: gene Location: 1031952-1032887 bp Feature: domain Description: Phage_CI_repr Location: 1032036-1032219 bp Feature: domain Description: Phage_CI_repr Location: 1032 036-1032 2 19 bp Feature: domain Description: Phage_CI_repr Location: 1032348-1032540 bp Feature: domain Description: Phage_CI_repr Location: 1032 348-1032 540 bp Feature: domain Description: Phage_CI_C Location: 1032567-1032861 bp Feature: domain Description: Phage_CI_C Location: 1032 567-1032 861 bp Feature: gene Location: 1369754-1370893 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369937-1370837 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369937-1370837 bp Feature: gene Location: 1371064-1371306 bp Feature: domain Description: DinI Location: 1371115-1371295 bp Feature: domain Description: DinI Location: 1371115-13712 95 bp Feature: gene Location: 1371924-1373408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372326-1373016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 32 6-1373016 bp Feature: gene Location: 1373487-1373906 bp Feature: domain Description: PRK10276 Location: 1373490-1373901 bp Feature: domain Description: PRK102 76 Location: 1373490-1373901 bp Feature: gene Location: 1373909-1375174 bp Feature: domain Description: umuC Location: 1373912-1375172 bp Feature: domain Description: umuC Location: 1373912 -1375172 bp Feature: gene Location: 1554669-1555373 bp Feature: domain Description: Rve Location: 1554672-1555317 bp Feature: domain Description: Rve Location: 1554672 -1555317 bp Feature: gene Location: 1555439-1555888 bp Feature: domain Description: PinE Location: 1555448-1555880 bp Feature: domain Description: PinE Location: 1555448-1555880 bp Feature: gene Location: 1557286-1558770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557688-1558378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557688-1558378 bp Feature: gene Location: 1558763-1559269 bp Feature: domain Description: PRK10276 Location: 1558853-1559264 bp Feature: domain Description: PRK102 76 Location: 1558853-15592 64 bp Feature: gene Location: 1559271-1560536 bp Feature: domain Description: umuC Location: 1559274-1560534 bp Feature: domain Description: umuC Location: 15592 74-1560534 bp Feature: gene Location: 2185559-2186992 bp Feature: domain Description: ALDH_SaliADH Location: 2185694-2186963 bp Feature: domain Description: ALDH_SaliADH Location: 2 185694-2 186963 bp Feature: gene Location: 2187006-2187755 bp Feature: domain Description: MhpC Location: 2187018-2187747 bp Feature: domain Description: MhpC Location: 2 187018-2 187747 bp Feature: gene Location: 2187837-2189321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2188239-2188929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1882 39-2 18892 9 bp Feature: gene Location: 2189754-2189927 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 2189766-2189925 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 2 189766-2 18992 5 bp Feature: gene Location: 2190122-2190214 bp Feature: domain Description: YncL Location: 2190125-2190212 bp Feature: domain Description: YncL Location: 2 19012 5-2 1902 12 bp Feature: gene Location: 2779837-2780895 bp Feature: domain Description: YccC Location: 2779843-2780881 bp Feature: domain Description: YccC Location: 2 779843-2 780881 bp Feature: gene Location: 2780994-2781467 bp Feature: domain Description: PRK10016 Location: 2780997-2781456 bp Feature: domain Description: PRK10016 Location: 2 780997-2 781456 bp Feature: gene Location: 2781549-2783033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2781951-2782641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 781951-2 782 641 bp Feature: gene Location: 2783554-2784717 bp Feature: domain Description: dacD Location: 2783557-2784712 bp Feature: domain Description: dacD Location: 2 783557-2 784712 bp Feature: gene Location: 2784898-2786322 bp Feature: domain Description: SbcB Location: 2784904-2786320 bp Feature: domain Description: SbcB Location: 2 784904-2 78632 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), ALDH_SaliADH (cd07105), MhpC (COG0596), Toxin_GhoT_OrtT (pfam10753), YncL (NF000537), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ089682.1 Klebsiella pneumoniae strain UCI75 genomic scaffold aeurC-supercont1.10, whole genome shotgun sequence (52845 bp)
Overview 1 RT 1: 5896-10338 bp Neighborhood of RT #1 [5896, 10340] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 5896-7167 bp Feature: domain Description: umuC Location: 5899-7159 bp Feature: domain Description: umuC Location: 5899-7159 bp Feature: gene Location: 7167-7598 bp Feature: domain Description: PRK10276 Location: 7218-7581 bp Feature: domain Description: PRK10276 Location: 7218-7581 bp Feature: gene Location: 8007-9491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8409-9099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8409-9099 bp Feature: gene Location: 9643-9918 bp Feature: domain Description: InsA Location: 9649-9910 bp Feature: domain Description: InsA Location: 9649-9910 bp Feature: gene Location: 9963-10340 bp Feature: domain Description: DDE_Tnp_IS1 Location: 9966-10338 bp Feature: domain Description: DDE_Tnp_IS1 Location: 9966-103 3 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)