myRT

myRT report for GCA_001034215.1_Kleb_pneu_UCI81_V1

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Seq: KQ089693.1 Klebsiella pneumoniae strain UCI81 genomic scaffold aeurG-supercont1.3, whole genome shotgun sequence (137650 bp)
Overview 1 RT 1: 78648-83642 bp Neighborhood of RT #1 [78648, 83644] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 78648-79919 bp Feature: domain Description: umuC Location: 78651-79914 bp Feature: domain Description: umuC Location: 78651 -7991 4 bp Feature: gene Location: 79919-80344 bp Feature: domain Description: PRK10276 Location: 79922-80330 bp Feature: domain Description: PRK1 0276 Location: 79922-80330 bp Feature: gene Location: 80747-82234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81152-81842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 1 52-81 842 bp Feature: gene Location: 82468-82698 bp Feature: gene Location: 83219-83644 bp Feature: domain Description: Antirestrict Location: 83354-83642 bp Feature: domain Description: Antirestrict Location: 83354-83642 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089691.1 Klebsiella pneumoniae strain UCI81 genomic scaffold aeurG-supercont1.1, whole genome shotgun sequence (4875671 bp)
Overview 1 RT 1: 582664-586071 bp 2 RT 2: 1025558-1031163 bp 3 RT 3: 1367875-1373293 bp 4 RT 4: 2131411-2136064 bp 5 RT 5: 2726270-2732753 bp 6 RT 6: 3154336-3159543 bp Neighborhood of RT #1 [582664, 586172] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025558, 1031189] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1367875, 1373295] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2131411, 2136066] ALDH_SaliADH MhpC RVT-GII Toxin_GhoT_OrtT YncL Neighborhood of RT #5 [2726270, 2732755] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #6 [3154336, 3159572] PHA02515 RVT-GII DUF1902 Feature: gene Location: 582664-583395 bp Feature: domain Description: Laminin_G_3 Location: 582985-583339 bp Feature: domain Description: Laminin_G_3 Location: 582 985-583339 bp Feature: gene Location: 583392-583601 bp Feature: gene Location: 584051-585538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584456-585146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584456-585146 bp Feature: gene Location: 585616-585855 bp Feature: gene Location: 585855-586172 bp Feature: domain Description: PRK10276 Location: 585861-585975 bp Feature: domain Description: PRK102 76 Location: 585861-585975 bp Feature: domain Description: PRK10276 Location: 586002-586071 bp Feature: domain Description: PRK102 76 Location: 586002 -586071 bp Feature: gene Location: 1025558-1026121 bp Feature: domain Description: YbjK Location: 1025564-1026101 bp Feature: domain Description: YbjK Location: 102 5564-102 6101 bp Feature: gene Location: 1026244-1027296 bp Feature: domain Description: int Location: 1026247-1027246 bp Feature: domain Description: int Location: 102 62 47-102 72 46 bp Feature: gene Location: 1027712-1029199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028117-1028807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8117-102 8807 bp Feature: gene Location: 1029298-1030242 bp Feature: gene Location: 1030254-1031189 bp Feature: domain Description: Phage_CI_repr Location: 1030338-1030521 bp Feature: domain Description: Phage_CI_repr Location: 1030338-103052 1 bp Feature: domain Description: Phage_CI_repr Location: 1030650-1030842 bp Feature: domain Description: Phage_CI_repr Location: 1030650-1030842 bp Feature: domain Description: Phage_CI_C Location: 1030869-1031163 bp Feature: domain Description: Phage_CI_C Location: 1030869-1031163 bp Feature: gene Location: 1367875-1369014 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1368058-1368958 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1368058-1368958 bp Feature: gene Location: 1369185-1369427 bp Feature: domain Description: DinI Location: 1369236-1369416 bp Feature: domain Description: DinI Location: 13692 36-1369416 bp Feature: gene Location: 1370042-1371529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370447-1371137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370447-1371137 bp Feature: gene Location: 1371608-1372027 bp Feature: domain Description: PRK10276 Location: 1371611-1372022 bp Feature: domain Description: PRK102 76 Location: 1371611-1372 02 2 bp Feature: gene Location: 1372030-1373295 bp Feature: domain Description: umuC Location: 1372033-1373293 bp Feature: domain Description: umuC Location: 1372 033-13732 93 bp Feature: gene Location: 2131411-2132844 bp Feature: domain Description: ALDH_SaliADH Location: 2131546-2132815 bp Feature: domain Description: ALDH_SaliADH Location: 2 131546-2 132 815 bp Feature: gene Location: 2132858-2133607 bp Feature: domain Description: MhpC Location: 2132870-2133599 bp Feature: domain Description: MhpC Location: 2 132 870-2 133599 bp Feature: gene Location: 2133689-2135176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2134094-2134784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 134094-2 134784 bp Feature: gene Location: 2135606-2135779 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 2135618-2135777 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 2 135618-2 135777 bp Feature: gene Location: 2135974-2136066 bp Feature: domain Description: YncL Location: 2135977-2136064 bp Feature: domain Description: YncL Location: 2 135977-2 136064 bp Feature: gene Location: 2726270-2727328 bp Feature: domain Description: YccC Location: 2726276-2727314 bp Feature: domain Description: YccC Location: 2 72 62 76-2 72 7314 bp Feature: gene Location: 2727427-2727900 bp Feature: domain Description: PRK10016 Location: 2727430-2727889 bp Feature: domain Description: PRK10016 Location: 2 72 7430-2 72 7889 bp Feature: gene Location: 2727982-2729469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728387-2729077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 8387-2 72 9077 bp Feature: gene Location: 2729987-2731150 bp Feature: domain Description: dacD Location: 2729990-2731145 bp Feature: domain Description: dacD Location: 2 72 9990-2 731145 bp Feature: gene Location: 2731331-2732755 bp Feature: domain Description: SbcB Location: 2731337-2732753 bp Feature: domain Description: SbcB Location: 2 731337-2 732 753 bp Feature: gene Location: 3154336-3154488 bp Feature: gene Location: 3154497-3156866 bp Feature: domain Description: PHA02515 Location: 3154509-3154848 bp Feature: domain Description: PHA02 515 Location: 3154509-3154848 bp Feature: gene Location: 3157399-3158886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3157804-3158494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3157804-3158494 bp Feature: gene Location: 3158964-3159224 bp Feature: gene Location: 3159315-3159572 bp Feature: domain Description: DUF1902 Location: 3159357-3159543 bp Feature: domain Description: DUF1902 Location: 3159357-3159543 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
ALDH_SaliADH (cd07105), MhpC (COG0596), Toxin_GhoT_OrtT (pfam10753), YncL (NF000537), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), PHA02515 (hypothetical protein; Provisional), DUF1902 (pfam08972)