myRT

myRT report for GCA_001034245.1_Kleb_pneu_UCI91_V1

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Seq: KQ089707.1 Klebsiella pneumoniae strain UCI91 genomic scaffold aeurP-supercont1.4, whole genome shotgun sequence (133354 bp)
Overview 1 RT 1: 89793-94787 bp Neighborhood of RT #1 [89793, 94789] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 89793-91064 bp Feature: domain Description: umuC Location: 89796-91059 bp Feature: domain Description: umuC Location: 89796-91 059 bp Feature: gene Location: 91064-91489 bp Feature: domain Description: PRK10276 Location: 91067-91475 bp Feature: domain Description: PRK1 0276 Location: 91 067-91 475 bp Feature: gene Location: 91892-93379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92297-92987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92297-92987 bp Feature: gene Location: 93613-93843 bp Feature: gene Location: 94364-94789 bp Feature: domain Description: Antirestrict Location: 94499-94787 bp Feature: domain Description: Antirestrict Location: 94499-94787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089704.1 Klebsiella pneumoniae strain UCI91 genomic scaffold aeurP-supercont1.1, whole genome shotgun sequence (3516431 bp)
Overview 1 RT 1: 583272-586679 bp 2 RT 2: 1024829-1030434 bp 3 RT 3: 1367482-1372900 bp 4 RT 4: 1554026-1559891 bp 5 RT 5: 2929702-2936185 bp Neighborhood of RT #1 [583272, 586780] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1024829, 1030460] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1367482, 1372902] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554026, 1559893] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2929702, 2936187] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583272-584003 bp Feature: domain Description: Laminin_G_3 Location: 583593-583947 bp Feature: domain Description: Laminin_G_3 Location: 583593-583947 bp Feature: gene Location: 584000-584209 bp Feature: gene Location: 584659-586146 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585064-585754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585064-585754 bp Feature: gene Location: 586224-586463 bp Feature: gene Location: 586463-586780 bp Feature: domain Description: PRK10276 Location: 586469-586583 bp Feature: domain Description: PRK102 76 Location: 586469-586583 bp Feature: domain Description: PRK10276 Location: 586610-586679 bp Feature: domain Description: PRK102 76 Location: 586610-586679 bp Feature: gene Location: 1024829-1025392 bp Feature: domain Description: YbjK Location: 1024835-1025372 bp Feature: domain Description: YbjK Location: 102 4835-102 5372 bp Feature: gene Location: 1025515-1026567 bp Feature: domain Description: int Location: 1025518-1026517 bp Feature: domain Description: int Location: 102 5518-102 6517 bp Feature: gene Location: 1026983-1028470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027388-1028078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 7388-102 8078 bp Feature: gene Location: 1028569-1029513 bp Feature: gene Location: 1029525-1030460 bp Feature: domain Description: Phage_CI_repr Location: 1029609-1029792 bp Feature: domain Description: Phage_CI_repr Location: 102 9609-102 9792 bp Feature: domain Description: Phage_CI_repr Location: 1029921-1030113 bp Feature: domain Description: Phage_CI_repr Location: 102 992 1-1030113 bp Feature: domain Description: Phage_CI_C Location: 1030140-1030434 bp Feature: domain Description: Phage_CI_C Location: 1030140-1030434 bp Feature: gene Location: 1367482-1368621 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367665-1368565 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1367665-1368565 bp Feature: gene Location: 1368792-1369034 bp Feature: domain Description: DinI Location: 1368843-1369023 bp Feature: domain Description: DinI Location: 1368843-136902 3 bp Feature: gene Location: 1369649-1371136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370054-1370744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370054-1370744 bp Feature: gene Location: 1371215-1371634 bp Feature: domain Description: PRK10276 Location: 1371218-1371629 bp Feature: domain Description: PRK102 76 Location: 13712 18-137162 9 bp Feature: gene Location: 1371637-1372902 bp Feature: domain Description: umuC Location: 1371640-1372900 bp Feature: domain Description: umuC Location: 1371640-1372 900 bp Feature: gene Location: 1554026-1554730 bp Feature: domain Description: Rve Location: 1554029-1554674 bp Feature: domain Description: Rve Location: 155402 9-1554674 bp Feature: gene Location: 1554796-1555245 bp Feature: domain Description: PinE Location: 1554805-1555237 bp Feature: domain Description: PinE Location: 1554805-15552 37 bp Feature: gene Location: 1556640-1558127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557045-1557735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557045-1557735 bp Feature: gene Location: 1558120-1558626 bp Feature: domain Description: PRK10276 Location: 1558210-1558621 bp Feature: domain Description: PRK102 76 Location: 15582 10-155862 1 bp Feature: gene Location: 1558628-1559893 bp Feature: domain Description: umuC Location: 1558631-1559891 bp Feature: domain Description: umuC Location: 1558631-1559891 bp Feature: gene Location: 2929702-2930760 bp Feature: domain Description: YccC Location: 2929708-2930746 bp Feature: domain Description: YccC Location: 2 92 9708-2 930746 bp Feature: gene Location: 2930859-2931332 bp Feature: domain Description: PRK10016 Location: 2930862-2931321 bp Feature: domain Description: PRK10016 Location: 2 930862 -2 93132 1 bp Feature: gene Location: 2931414-2932901 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2931819-2932509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 931819-2 932 509 bp Feature: gene Location: 2933419-2934582 bp Feature: domain Description: dacD Location: 2933422-2934577 bp Feature: domain Description: dacD Location: 2 93342 2 -2 934577 bp Feature: gene Location: 2934763-2936187 bp Feature: domain Description: SbcB Location: 2934769-2936185 bp Feature: domain Description: SbcB Location: 2 934769-2 936185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)