myRT

myRT report for GCA_001034295.1_Kleb_pneu_UCI93_V1

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Seq: KQ089724.1 Klebsiella pneumoniae strain UCI93 genomic scaffold aeurH-supercont1.1, whole genome shotgun sequence (3828760 bp)
Overview 1 RT 1: 632991-639289 bp 2 RT 2: 722583-728188 bp 3 RT 3: 1066639-1071338 bp 4 RT 4: 1830930-1835583 bp 5 RT 5: 2429242-2435725 bp Neighborhood of RT #1 [632991, 639289] bioD LivF RVT-GII UvrB Neighborhood of RT #2 [722583, 728214] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1066639, 1071340] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1830930, 1835585] ALDH_SaliADH MhpC RVT-GII Toxin_GhoT_OrtT YncL Neighborhood of RT #5 [2429242, 2435727] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 632991-633713 bp Feature: domain Description: bioD Location: 633006-633666 bp Feature: domain Description: bioD Location: 633006-633666 bp Feature: gene Location: 633655-634377 bp Feature: domain Description: LivF Location: 633658-634336 bp Feature: domain Description: LivF Location: 633658-634336 bp Feature: gene Location: 635052-636536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 635454-636144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 635454-6361 44 bp Feature: gene Location: 636998-639019 bp Feature: domain Description: UvrB Location: 637004-639005 bp Feature: domain Description: UvrB Location: 637004-639005 bp Feature: gene Location: 639197-639289 bp Feature: gene Location: 722583-723146 bp Feature: domain Description: YbjK Location: 722589-723126 bp Feature: domain Description: YbjK Location: 722589-7231 26 bp Feature: gene Location: 723269-724321 bp Feature: domain Description: int Location: 723272-724271 bp Feature: domain Description: int Location: 723272-724271 bp Feature: gene Location: 724740-726224 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 725142-725832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7251 42-725832 bp Feature: gene Location: 726323-727267 bp Feature: gene Location: 727279-728214 bp Feature: domain Description: Phage_CI_repr Location: 727363-727546 bp Feature: domain Description: Phage_CI_repr Location: 727363-727546 bp Feature: domain Description: Phage_CI_repr Location: 727675-727867 bp Feature: domain Description: Phage_CI_repr Location: 727675-727867 bp Feature: domain Description: Phage_CI_C Location: 727894-728188 bp Feature: domain Description: Phage_CI_C Location: 727894-7281 88 bp Feature: gene Location: 1066639-1066881 bp Feature: domain Description: DinI Location: 1066690-1066870 bp Feature: domain Description: DinI Location: 1 066690-1 066870 bp Feature: gene Location: 1067443-1067637 bp Feature: gene Location: 1068090-1069574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1068492-1069182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 068492-1 0691 82 bp Feature: gene Location: 1069653-1070072 bp Feature: domain Description: PRK10276 Location: 1069656-1070067 bp Feature: domain Description: PRK1 0276 Location: 1 069656-1 070067 bp Feature: gene Location: 1070075-1071340 bp Feature: domain Description: umuC Location: 1070078-1071338 bp Feature: domain Description: umuC Location: 1 070078-1 071 338 bp Feature: gene Location: 1830930-1832363 bp Feature: domain Description: ALDH_SaliADH Location: 1831065-1832334 bp Feature: domain Description: ALDH_SaliADH Location: 1 831 065-1 832334 bp Feature: gene Location: 1832377-1833126 bp Feature: domain Description: MhpC Location: 1832389-1833118 bp Feature: domain Description: MhpC Location: 1 832389-1 8331 1 8 bp Feature: gene Location: 1833208-1834692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1833610-1834300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 83361 0-1 834300 bp Feature: gene Location: 1835125-1835298 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 1835137-1835296 bp Feature: domain Description: Toxin_GhoT_OrtT Location: 1 8351 37-1 835296 bp Feature: gene Location: 1835493-1835585 bp Feature: domain Description: YncL Location: 1835496-1835583 bp Feature: domain Description: YncL Location: 1 835496-1 835583 bp Feature: gene Location: 2429242-2430300 bp Feature: domain Description: YccC Location: 2429248-2430286 bp Feature: domain Description: YccC Location: 2429248-2430286 bp Feature: gene Location: 2430399-2430872 bp Feature: domain Description: PRK10016 Location: 2430402-2430861 bp Feature: domain Description: PRK1 001 6 Location: 2430402-2430861 bp Feature: gene Location: 2430954-2432438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2431356-2432046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2431 356-2432046 bp Feature: gene Location: 2432959-2434122 bp Feature: domain Description: dacD Location: 2432962-2434117 bp Feature: domain Description: dacD Location: 2432962-24341 1 7 bp Feature: gene Location: 2434303-2435727 bp Feature: domain Description: SbcB Location: 2434309-2435725 bp Feature: domain Description: SbcB Location: 2434309-2435725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bioD (TIGR00347), LivF (COG0410), RVT-GII, UvrB (pfam12344), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)
umuC (PRK03609), ALDH_SaliADH (cd07105), MhpC (COG0596), Toxin_GhoT_OrtT (pfam10753), YncL (NF000537), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)