myRT

myRT report for GCA_001034325.1_Kleb_pneu_UCI95_V1

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Seq: KQ089742.1 Klebsiella pneumoniae strain UCI95 genomic scaffold aeuss-supercont1.3, whole genome shotgun sequence (124330 bp)
Overview 1 RT 1: 66747-71741 bp Neighborhood of RT #1 [66747, 71743] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 66747-68018 bp Feature: domain Description: umuC Location: 66750-68013 bp Feature: domain Description: umuC Location: 66750-6801 3 bp Feature: gene Location: 68018-68443 bp Feature: domain Description: PRK10276 Location: 68021-68429 bp Feature: domain Description: PRK1 0276 Location: 68021 -68429 bp Feature: gene Location: 68849-70333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69251-69941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69251 -69941 bp Feature: gene Location: 70567-70797 bp Feature: gene Location: 71318-71743 bp Feature: domain Description: Antirestrict Location: 71453-71741 bp Feature: domain Description: Antirestrict Location: 71 453-71 741 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089740.1 Klebsiella pneumoniae strain UCI95 genomic scaffold aeuss-supercont1.1, whole genome shotgun sequence (4543033 bp)
Overview 1 RT 1: 1808966-1815437 bp 2 RT 2: 3169992-3175356 bp 3 RT 3: 3513876-3519487 bp 4 RT 4: 3957228-3960680 bp Neighborhood of RT #1 [1808966, 1815451] SbcB dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [3169992, 3175412] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [3513876, 3519507] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #4 [3957228, 3960736] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 1808966-1810390 bp Feature: domain Description: SbcB Location: 1808972-1810388 bp Feature: domain Description: SbcB Location: 1808972 -1810388 bp Feature: gene Location: 1810571-1811734 bp Feature: domain Description: dacD Location: 1810574-1811729 bp Feature: domain Description: dacD Location: 1810574-181172 9 bp Feature: gene Location: 1812255-1813739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1812657-1813347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1812 657-1813347 bp Feature: gene Location: 1813821-1814294 bp Feature: domain Description: PRK10016 Location: 1813824-1814283 bp Feature: domain Description: PRK10016 Location: 181382 4-18142 83 bp Feature: gene Location: 1814393-1815451 bp Feature: domain Description: YccC Location: 1814399-1815437 bp Feature: domain Description: YccC Location: 1814399-1815437 bp Feature: gene Location: 3169992-3171257 bp Feature: domain Description: umuC Location: 3169995-3171255 bp Feature: domain Description: umuC Location: 3169995-31712 55 bp Feature: gene Location: 3171260-3171679 bp Feature: domain Description: PRK10276 Location: 3171263-3171674 bp Feature: domain Description: PRK102 76 Location: 31712 63-3171674 bp Feature: gene Location: 3171758-3173242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3172160-3172850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3172 160-3172 850 bp Feature: gene Location: 3173860-3174102 bp Feature: domain Description: DinI Location: 3173911-3174091 bp Feature: domain Description: DinI Location: 3173911-3174091 bp Feature: gene Location: 3174273-3175412 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3174456-3175356 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3174456-3175356 bp Feature: gene Location: 3513876-3514811 bp Feature: domain Description: Phage_CI_repr Location: 3513960-3514143 bp Feature: domain Description: Phage_CI_repr Location: 3513960-3514143 bp Feature: domain Description: Phage_CI_repr Location: 3514272-3514464 bp Feature: domain Description: Phage_CI_repr Location: 35142 72 -3514464 bp Feature: domain Description: Phage_CI_C Location: 3514491-3514785 bp Feature: domain Description: Phage_CI_C Location: 3514491-3514785 bp Feature: gene Location: 3514823-3515767 bp Feature: gene Location: 3515866-3517350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3516268-3516958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35162 68-3516958 bp Feature: gene Location: 3517769-3518821 bp Feature: domain Description: int Location: 3517772-3518771 bp Feature: domain Description: int Location: 3517772 -3518771 bp Feature: gene Location: 3518944-3519507 bp Feature: domain Description: YbjK Location: 3518950-3519487 bp Feature: domain Description: YbjK Location: 3518950-3519487 bp Feature: gene Location: 3957228-3957545 bp Feature: domain Description: PRK10276 Location: 3957234-3957348 bp Feature: domain Description: PRK102 76 Location: 39572 34-3957348 bp Feature: domain Description: PRK10276 Location: 3957375-3957444 bp Feature: domain Description: PRK102 76 Location: 3957375-3957444 bp Feature: gene Location: 3957545-3957784 bp Feature: gene Location: 3957862-3959346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3958264-3958954 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39582 64-3958954 bp Feature: gene Location: 3959799-3960008 bp Feature: gene Location: 3960005-3960736 bp Feature: domain Description: Laminin_G_3 Location: 3960326-3960680 bp Feature: domain Description: Laminin_G_3 Location: 396032 6-3960680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)

Seq: KQ089746.1 Klebsiella pneumoniae strain UCI95 genomic scaffold aeuss-supercont1.7, whole genome shotgun sequence (34302 bp)
Overview 1 RT 1: 2748-7190 bp Neighborhood of RT #1 [2748, 7192] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 2748-4019 bp Feature: domain Description: umuC Location: 2751-4011 bp Feature: domain Description: umuC Location: 2751-4011 bp Feature: gene Location: 4019-4450 bp Feature: domain Description: PRK10276 Location: 4070-4433 bp Feature: domain Description: PRK10276 Location: 4070-443 3 bp Feature: gene Location: 4859-6343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5261-5951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5261-5951 bp Feature: gene Location: 6495-6770 bp Feature: domain Description: InsA Location: 6501-6762 bp Feature: domain Description: InsA Location: 6501-6762 bp Feature: gene Location: 6815-7192 bp Feature: domain Description: DDE_Tnp_IS1 Location: 6818-7190 bp Feature: domain Description: DDE_Tnp_IS1 Location: 6818-7190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)