myRT

myRT report for GCA_001034365.1_Kleb_pneu_UCI96_V1

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Seq: KQ089766.1 Klebsiella pneumoniae strain UCI96 genomic scaffold aeuso-supercont1.3, whole genome shotgun sequence (198168 bp)
Overview 1 RT 1: 181644-186438 bp Neighborhood of RT #1 [181644, 186440] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 181644-182693 bp Ori: KMI88119.1 Feature: domain Description: umuC Location: 181647-182643 bp Feature: domain Description: umuC Location: 1 81 647-1 82643 bp Feature: gene Location: 182693-183118 bp Ori: KMI88120.1 Feature: domain Description: PRK10276 Location: 182696-183104 bp Feature: domain Description: PRK1 0276 Location: 1 82696-1 831 04 bp Feature: gene Location: 183598-185031 bp Ori: KMI88121.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 183925-184639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 83925-1 84639 bp Feature: gene Location: 185265-185495 bp Feature: gene Location: 186015-186440 bp Ori: KMI88123.1 Feature: domain Description: Antirestrict Location: 186150-186438 bp Feature: domain Description: Antirestrict Location: 1 861 50-1 86438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ089764.1 Klebsiella pneumoniae strain UCI96 genomic scaffold aeuso-supercont1.1, whole genome shotgun sequence (4432030 bp)
Overview 1 RT 1: 3739888-3748506 bp Neighborhood of RT #1 [3739888, 3748523] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 3739888-3740601 bp Ori: KMI95249.1 Feature: domain Description: YqgA Location: 3739894-3740596 bp Feature: domain Description: YqgA Location: 3739894-3740596 bp Feature: gene Location: 3741419-3742282 bp Ori: KMI95250.1 Feature: domain Description: PRK09692 Location: 3741443-3742280 bp Feature: domain Description: PRK09692 Location: 3741443-3742 2 80 bp Feature: gene Location: 3743040-3745121 bp Ori: KMI95251.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3743451-3743895 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3743451-3743895 bp Feature: gene Location: 3745118-3747712 bp Ori: KMI95252.1 Feature: domain Description: FimD Location: 3745160-3747701 bp Feature: domain Description: FimD Location: 3745160-3747701 bp Feature: gene Location: 3747759-3748523 bp Ori: KMI95253.1 Feature: domain Description: FimC Location: 3747804-3748506 bp Feature: domain Description: FimC Location: 3747804-3748506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)