myRT

myRT report for GCA_001037505.1_Citr_freu_complex_MGH109_V1

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Seq: KQ089841.1 Citrobacter sp. MGH109 genomic scaffold aetgK-supercont1.5, whole genome shotgun sequence (114091 bp)
Overview 1 RT 1: 90193-94655 bp Neighborhood of RT #1 [90193, 94655] umuC PRK10276 RVT-GII Feature: gene Location: 90193-91458 bp Ori: KLV68693.1 Feature: domain Description: umuC Location: 90196-91450 bp Feature: domain Description: umuC Location: 901 96-91 450 bp Feature: gene Location: 91458-91874 bp Ori: KLV68694.1 Feature: domain Description: PRK10276 Location: 91497-91866 bp Feature: domain Description: PRK1 0276 Location: 91 497-91 866 bp Feature: gene Location: 92276-93763 bp Ori: KLV68695.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92681-93371 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92681 -93371 bp Feature: gene Location: 94037-94540 bp Feature: gene Location: 94524-94655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KQ089837.1 Citrobacter sp. MGH109 genomic scaffold aetgK-supercont1.1, whole genome shotgun sequence (3521851 bp)
Overview 1 RT 1: 393969-398305 bp 2 RT 2: 2915376-2919347 bp Neighborhood of RT #1 [393969, 398305] YigB YigB PRK09692 RVT-Retrons Neighborhood of RT #2 [2915376, 2919874] RVT-UG2 PinE zf-ribbon_3 Feature: gene Location: 393969-394814 bp Ori: KLV86777.1 Feature: domain Description: YigB Location: 393972-394413 bp Feature: domain Description: YigB Location: 393972 -394413 bp Feature: domain Description: YigB Location: 394470-394695 bp Feature: domain Description: YigB Location: 394470-394695 bp Feature: gene Location: 394839-396026 bp Ori: KLV86778.1 Feature: domain Description: PRK09692 Location: 394842-396021 bp Feature: domain Description: PRK09692 Location: 394842 -39602 1 bp Feature: gene Location: 396324-397286 bp Ori: KLV86779.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 396504-397029 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 396504-39702 9 bp Feature: gene Location: 397314-397541 bp Feature: gene Location: 398030-398305 bp Feature: gene Location: 2915376-2915879 bp Feature: gene Location: 2915876-2916022 bp Feature: gene Location: 2916951-2918237 bp Ori: KLV81831.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2917152-2917944 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 917152 -2 917944 bp Feature: gene Location: 2918336-2918914 bp Ori: KLV81832.1 Feature: domain Description: PinE Location: 2918345-2918900 bp Feature: domain Description: PinE Location: 2 918345-2 918900 bp Feature: gene Location: 2919272-2919874 bp Ori: KLV81833.1 Feature: domain Description: zf-ribbon_3 Location: 2919281-2919347 bp Feature: domain Description: zf-ribbon_3 Location: 2 9192 81-2 919347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YigB (COG1011), PRK09692 (Integrase; provisional), RVT-Retrons, RVT-UG2, PinE (COG1961), zf-ribbon_3 (pfam13248)