myRT

myRT report for GCA_001038365.1_ASM103836v1

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Seq: LDZO01000026.1 Klebsiella pneumoniae strain JS86C16 contig_26, whole genome shotgun sequence (33261 bp)
Overview 1 RT 1: 14015-20484 bp Neighborhood of RT #1 [14015, 20498] SbcB dacD RVT-GII PRK10016 YccC Feature: gene Location: 14015-15439 bp Ori: KMK37471.1 Gene: sbcB Feature: domain Description: SbcB Location: 14021-15437 bp Feature: domain Description: SbcB Location: 1 4021 -1 5437 bp Feature: gene Location: 15620-16783 bp Ori: KMK37489.1 Feature: domain Description: dacD Location: 15623-16778 bp Feature: domain Description: dacD Location: 1 5623-1 6778 bp Feature: gene Location: 17377-18786 bp Ori: KMK37472.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17704-18394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7704-1 8394 bp Feature: gene Location: 18868-19341 bp Ori: KMK37473.1 Feature: domain Description: PRK10016 Location: 18871-19330 bp Feature: domain Description: PRK1 001 6 Location: 1 8871 -1 9330 bp Feature: gene Location: 19440-20498 bp Ori: KMK37474.1 Feature: domain Description: YccC Location: 19446-20484 bp Feature: domain Description: YccC Location: 1 9446-20484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)

Seq: LDZO01000014.1 Klebsiella pneumoniae strain JS86C16 contig_14, whole genome shotgun sequence (152214 bp)
Overview 1 RT 1: 37370-44285 bp Neighborhood of RT #1 [37370, 44290] PRK00872 PRK09678 RVT-UG17 SLATT_5 PRK11462 Feature: gene Location: 37370-37837 bp Ori: KMK42731.1 Feature: domain Description: PRK00872 Location: 37376-37832 bp Feature: domain Description: PRK00872 Location: 37376-37832 bp Feature: gene Location: 37961-38170 bp Ori: KMK42732.1 Feature: domain Description: PRK09678 Location: 38012-38144 bp Feature: domain Description: PRK09678 Location: 38012 -38144 bp Feature: gene Location: 39075-40484 bp Ori: KMK42733.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 39312-39924 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 39312 -3992 4 bp Feature: gene Location: 40679-41320 bp Ori: KMK42835.1 Feature: domain Description: SLATT_5 Location: 40682-41285 bp Feature: domain Description: SLATT_5 Location: 40682 -412 85 bp Feature: gene Location: 42896-44290 bp Ori: KMK42734.1 Feature: domain Description: PRK11462 Location: 42899-44285 bp Feature: domain Description: PRK11462 Location: 42 899-442 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00872 (hypothetical protein; Provisional), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG17, SLATT_5 (pfam18160), PRK11462 (putative transporter; Provisional)