myRT

myRT report for GCA_001038455.1_ASM103845v1

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Seq: LDUY01000009.1 Fructobacillus sp. EFB-N1 FEFB_c000009, whole genome shotgun sequence (39720 bp)
Overview 1 RT 1: 95-3608 bp Neighborhood of RT #1 [95, 3608] HTH_XRE RVT-Retrons Feature: gene Location: 95-235 bp Ori: KMK53584.1 Feature: domain Description: HTH_XRE Location: 119-230 bp Feature: domain Description: HTH_XRE Location: 1 1 9-230 bp Feature: gene Location: 672-1031 bp Ori: KMK53585.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 678-1017 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 678-1 01 7 bp Feature: gene Location: 2523-2699 bp Feature: gene Location: 3279-3608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons

Seq: LDUY01000008.1 Fructobacillus sp. EFB-N1 FEFB_c000008, whole genome shotgun sequence (56920 bp)
Overview 1 RT 1: 34151-41673 bp Neighborhood of RT #1 [34151, 41673] Mod RVT-UG8 RVT-UG17 Hol_Tox Feature: gene Location: 34151-36055 bp Ori: KMK53656.1 Gene: mboIIM Feature: domain Description: Mod Location: 34349-35765 bp Feature: domain Description: Mod Location: 34349-35765 bp Feature: gene Location: 36374-36463 bp Feature: gene Location: 36961-39012 bp Ori: KMK53658.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 37486-37942 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 37486-37942 bp Feature: gene Location: 39257-40426 bp Ori: KMK53659.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 39350-39908 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 39350-39908 bp Feature: gene Location: 41153-41257 bp Ori: KMK53660.1 Feature: domain Description: Hol_Tox Location: 41159-41255 bp Feature: domain Description: Hol_Tox Location: 41159-412 55 bp Feature: gene Location: 41407-41673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mod (COG2189), RVT-UG8, RVT-UG17, Hol_Tox (pfam16935)