myRT

myRT report for GCA_001038845.1_ASM103884v1

Download annotations/find similar RTs

Seq: LDWI01000029.1 Bacillus stratosphericus strain LK18, whole genome shotgun sequence (37244 bp)
Overview 1 RT 1: 1-4920 bp Neighborhood of RT #1 [1, 4934] RVT-Retrons PRK15121 PRK03739 Feature: gene Location: 1-1171 bp Ori: KMK99075.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 127-715 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 27-71 5 bp Feature: gene Location: 1826-2713 bp Ori: KMK99076.1 Feature: domain Description: PRK15121 Location: 1853-2150 bp Feature: domain Description: PRK1 51 21 Location: 1 853-21 50 bp Feature: gene Location: 3273-4934 bp Ori: KMK99077.1 Feature: domain Description: PRK03739 Location: 3282-4920 bp Feature: domain Description: PRK03739 Location: 3282-4920 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PRK15121 (MDR efflux pump AcrAB transcriptional activator RobA), PRK03739 (2-isopropylmalate synthase; Validated)

Seq: LDWI01000018.1 Bacillus stratosphericus strain LK18, whole genome shotgun sequence (109995 bp)
Overview 1 RT 1: 15855-22093 bp Neighborhood of RT #1 [15855, 22716] DUF3800 HTH_36 RVT-UG7 ApeA_NTD1 Feature: gene Location: 15855-17000 bp Ori: KML00716.1 Feature: domain Description: DUF3800 Location: 15876-16758 bp Feature: domain Description: DUF3800 Location: 15876-16758 bp Feature: gene Location: 17825-19165 bp Ori: KML00717.1 Feature: domain Description: HTH_36 Location: 18245-18386 bp Feature: domain Description: HTH_36 Location: 182 45-18386 bp Feature: gene Location: 19330-20925 bp Ori: KML00718.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 19792-20176 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 19792 -2 0176 bp Feature: gene Location: 21289-22716 bp Ori: KML00719.1 Feature: domain Description: ApeA_NTD1 Location: 21307-22093 bp Feature: domain Description: ApeA_NTD1 Location: 2 1307-2 2 093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3800 (pfam12686), HTH_36 (pfam13730), RVT-UG7, ApeA_NTD1 (pfam18862)