myRT

myRT report for GCA_001038855.1_ASM103885v1

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Seq: LDWJ01000005.1 Bacillus marisflavi strain LK19, whole genome shotgun sequence (393698 bp)
Overview 1 RT 1: 172589-180178 bp Neighborhood of RT #1 [172589, 180231] recJ ssDNA-exonuc_C YrvD RVT-GII GIIM PRK13024 Post_transc_reg Feature: gene Location: 172589-174949 bp Ori: KML07276.1 Feature: domain Description: recJ Location: 172673-174275 bp Feature: domain Description: recJ Location: 1 72673-1 74275 bp Feature: domain Description: ssDNA-exonuc_C Location: 174293-174893 bp Feature: domain Description: ssDNA-exonuc_C Location: 1 74293-1 74893 bp Feature: gene Location: 175059-175403 bp Ori: KML07277.1 Feature: domain Description: YrvD Location: 175062-175290 bp Feature: domain Description: YrvD Location: 1 75062-1 75290 bp Feature: gene Location: 175622-176884 bp Ori: KML07278.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175820-176438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 75820-1 76438 bp Feature: domain Description: GIIM Note: maturase Location: 176486-176702 bp Feature: domain Description: GIIM Note: maturase Location: 1 76486-1 76702 bp Feature: gene Location: 177477-179738 bp Ori: KML07279.1 Feature: domain Description: PRK13024 Location: 177489-179715 bp Feature: domain Description: PRK1 3024 Location: 1 77489-1 7971 5 bp Feature: gene Location: 179911-180231 bp Ori: KML07280.1 Feature: domain Description: Post_transc_reg Location: 179938-180178 bp Feature: domain Description: Post_transc_reg Location: 1 79938-1 801 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT recJ (TIGR00644), ssDNA-exonuc_C (pfam10141), YrvD (COG5416), RVT-GII, GIIM (pfam08388), PRK13024 (bifunctional preprotein translocase subunit SecD/SecF; Reviewed), Post_transc_reg (pfam13797)

Seq: LDWJ01000033.1 Bacillus marisflavi strain LK19, whole genome shotgun sequence (6153 bp)
Overview 1 RT 1: 44-3759 bp Neighborhood of RT #1 [44, 3764] RVT-UG17 PulF ComGC Feature: gene Location: 44-1426 bp Ori: KMK99414.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 278-866 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 2 78-866 bp Feature: gene Location: 2366-3421 bp Ori: KMK99415.1 Feature: domain Description: PulF Location: 2408-3416 bp Feature: domain Description: PulF Location: 2 408-3416 bp Feature: gene Location: 3489-3764 bp Ori: KMK99422.1 Feature: domain Description: ComGC Location: 3492-3759 bp Feature: domain Description: ComGC Location: 3492 -3759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, PulF (COG1459), ComGC (COG4537)