myRT

myRT report for GCA_001044655.1_ASM104465v1

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Seq: LABH01000017.1 Bacillus cereus strain INRA A3 232, whole genome shotgun sequence (31979 bp)
Overview 1 RT 1: 26988-31013 bp Neighborhood of RT #1 [26988, 31366] AcrR TetR_C_17 MupV_like_SDR_e PRK14875 RVT_N RVT-GII GIIM Feature: gene Location: 26988-27554 bp Ori: KMQ30872.1 Feature: domain Description: AcrR Location: 27000-27261 bp Feature: domain Description: AcrR Location: 27000-27261 bp Feature: domain Description: TetR_C_17 Location: 27333-27486 bp Feature: domain Description: TetR_C_1 7 Location: 27333-27486 bp Feature: gene Location: 27613-29469 bp Ori: KMQ30873.1 Feature: domain Description: MupV_like_SDR_e Location: 27625-28501 bp Feature: domain Description: MupV_like_SDR_e Location: 27625-28501 bp Feature: domain Description: PRK14875 Location: 28705-29053 bp Feature: domain Description: PRK1 4875 Location: 28705-29053 bp Feature: gene Location: 29720-31366 bp Ori: KMQ30874.1 Feature: domain Description: RVT_N Location: 29762-29999 bp Feature: domain Description: RVT_N Location: 29762-29999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30053-30713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30053-3071 3 bp Feature: domain Description: GIIM Note: maturase Location: 30782-31013 bp Feature: domain Description: GIIM Note: maturase Location: 30782-31 01 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), TetR_C_17 (pfam17922), MupV_like_SDR_e (cd05263), PRK14875 (acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LABH01000019.1 Bacillus cereus strain INRA A3 234, whole genome shotgun sequence (453260 bp)
Overview 1 RT 1: 143225-150651 bp Neighborhood of RT #1 [143225, 150653] DUF4870 PRK10420 RVT-GII PRK09284 Feature: gene Location: 143225-143542 bp Ori: KMQ29821.1 Feature: domain Description: DUF4870 Location: 143243-143519 bp Feature: domain Description: DUF4870 Location: 1432 43-143519 bp Feature: gene Location: 143838-145499 bp Ori: KMQ29822.1 Feature: domain Description: PRK10420 Location: 143841-145497 bp Feature: domain Description: PRK1042 0 Location: 143841-145497 bp Feature: gene Location: 145699-145929 bp Ori: KMQ29823.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145747-145867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145747-145867 bp Feature: gene Location: 147419-147721 bp Feature: gene Location: 148893-150653 bp Ori: KMQ29825.1 Feature: domain Description: PRK09284 Location: 148911-150651 bp Feature: domain Description: PRK092 84 Location: 148911-150651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4870 (pfam09685), PRK10420 (L-lactate permease; Provisional), RVT-GII, PRK09284 (thiamine biosynthesis protein ThiC; Provisional)

Seq: LABH01000053.1 Bacillus cereus strain INRA A3 270, whole genome shotgun sequence (70953 bp)
Overview 1 RT 1: 614-4091 bp Neighborhood of RT #1 [614, 4147] RVT_N RVT-GII GIIM Nfu_N Virulence_fact HEAT DUF393 Feature: gene Location: 614-2260 bp Ori: KMQ24305.1 Feature: domain Description: RVT_N Location: 656-893 bp Feature: domain Description: RVT_N Location: 656-893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 947-1607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 947-1607 bp Feature: domain Description: GIIM Note: maturase Location: 1676-1907 bp Feature: domain Description: GIIM Note: maturase Location: 1676-1907 bp Feature: gene Location: 2633-3760 bp Ori: KMQ24306.1 Feature: domain Description: Nfu_N Location: 2651-2894 bp Feature: domain Description: Nfu_N Location: 2651-2894 bp Feature: domain Description: Virulence_fact Location: 2954-3188 bp Feature: domain Description: Virulence_fact Location: 2954-3 188 bp Feature: domain Description: HEAT Location: 3296-3749 bp Feature: domain Description: HEAT Location: 3 296-3 749 bp Feature: gene Location: 3764-4147 bp Ori: KMQ24307.1 Feature: domain Description: DUF393 Location: 3773-4091 bp Feature: domain Description: DUF3 93 Location: 3 773 -4091 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Nfu_N (smart00932), Virulence_fact (pfam13769), HEAT (sd00044), DUF393 (pfam04134)

Seq: LABH01000059.1 Bacillus cereus strain INRA A3 276, whole genome shotgun sequence (13079 bp)
Overview 1 RT 1: 9331-12611 bp Neighborhood of RT #1 [9331, 12964] PRK06752 AAA_18 RVT_N RVT-GII GIIM Feature: gene Location: 9331-9666 bp Ori: KMQ22594.1 Feature: domain Description: PRK06752 Location: 9334-9664 bp Feature: domain Description: PRK06752 Location: 9334 -9664 bp Feature: gene Location: 10003-10563 bp Ori: KMQ22595.1 Feature: domain Description: AAA_18 Location: 10018-10411 bp Feature: domain Description: AAA_18 Location: 10018-104 11 bp Feature: gene Location: 11318-12964 bp Ori: KMQ22596.1 Feature: domain Description: RVT_N Location: 11360-11597 bp Feature: domain Description: RVT_N Location: 11360-11597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11651-12311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11651-12311 bp Feature: domain Description: GIIM Note: maturase Location: 12380-12611 bp Feature: domain Description: GIIM Note: maturase Location: 12380-12611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06752 (single-stranded DNA-binding protein; Validated), AAA_18 (pfam13238), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LABH01000006.1 Bacillus cereus strain INRA A3 219, whole genome shotgun sequence (143232 bp)
Overview 1 RT 1: 12058-26810 bp 2 RT 2: 116580-127504 bp 3 RT 3: 130037-135269 bp 4 RT 4: 138869-142764 bp Neighborhood of RT #1 [12058, 26810] RVT-GII HNHc DEXDc MTS RVT-GII HNHc Neighborhood of RT #2 [116580, 127530] DUF1837 HEPN RVT-GII NT_KNTase_like RVT-GII Intron_maturas2 HNHc E1_enzyme_family Prok-E2_D Neighborhood of RT #3 [130037, 135269] beta_clamp RVT-GII COG4712 Neighborhood of RT #4 [138869, 143117] rpsA DUF2716 RVT_N RVT-GII GIIM Feature: gene Location: 12058-12687 bp Feature: gene Location: 13018-13731 bp Feature: gene Location: 15491-17290 bp Ori: KMQ32149.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15794-16496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15 794-16496 bp Feature: domain Description: HNHc Note: nucleases Location: 17021-17171 bp Feature: domain Description: HNHc Note: nucleases Location: 17021-17171 bp Feature: gene Location: 17991-19670 bp Ori: KMQ32150.1 Feature: domain Description: DEXDc Location: 18771-19644 bp Feature: domain Description: DEXDc Location: 18771-19644 bp Feature: gene Location: 19742-19969 bp Feature: gene Location: 19985-21106 bp Ori: KMQ32152.1 Feature: domain Description: MTS Location: 20081-20444 bp Feature: domain Description: MTS Location: 20081-20444 bp Feature: gene Location: 21251-23179 bp Ori: KMQ32153.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21572-22307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 215 72-22307 bp Feature: domain Description: HNHc Note: nucleases Location: 22898-23063 bp Feature: domain Description: HNHc Note: nucleases Location: 22898-23063 bp Feature: gene Location: 24220-24633 bp Feature: gene Location: 26247-26810 bp Feature: gene Location: 116580-117401 bp Ori: KMQ32229.1 Feature: domain Description: DUF1837 Location: 116808-117276 bp Feature: domain Description: DUF1837 Location: 116808-117276 bp Feature: gene Location: 117940-118383 bp Ori: KMQ32230.1 Feature: domain Description: HEPN Location: 117994-118342 bp Feature: domain Description: HEPN Location: 117994-118342 bp Feature: gene Location: 118529-120460 bp Ori: KMQ32231.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 118850-119585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11885 0-1195 85 bp Feature: gene Location: 120457-120660 bp Feature: gene Location: 121219-121617 bp Ori: KMQ32233.1 Feature: domain Description: NT_KNTase_like Location: 121294-121594 bp Feature: domain Description: NT_KNTase_like Location: 121294-1215 94 bp Feature: gene Location: 121639-122010 bp Feature: gene Location: 122824-124764 bp Ori: KMQ32235.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123154-123991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12315 4-123991 bp Feature: domain Description: Intron_maturas2 Location: 124123-124435 bp Feature: domain Description: Intron_maturas2 Location: 124123-124435 bp Feature: domain Description: HNHc Note: nucleases Location: 124558-124711 bp Feature: domain Description: HNHc Note: nucleases Location: 1245 5 8-124711 bp Feature: gene Location: 125333-125515 bp Ori: KMQ32236.1 Feature: domain Description: E1_enzyme_family Location: 125381-125501 bp Feature: domain Description: E1_enzyme_family Location: 125 381-125 5 01 bp Feature: gene Location: 126886-127530 bp Ori: KMQ32237.1 Feature: domain Description: Prok-E2_D Location: 127060-127504 bp Feature: domain Description: Prok-E2_D Location: 127060-1275 04 bp Feature: gene Location: 130037-131149 bp Ori: KMQ32242.1 Feature: domain Description: beta_clamp Location: 130040-131144 bp Feature: domain Description: beta_clamp Location: 130040-131144 bp Feature: gene Location: 131230-131757 bp Feature: gene Location: 131835-133733 bp Ori: KMQ32258.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132150-132852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13215 0-13285 2 bp Feature: gene Location: 134495-134851 bp Ori: KMQ32244.1 Feature: domain Description: COG4712 Location: 134504-134846 bp Feature: domain Description: COG4712 Location: 1345 04-134846 bp Feature: gene Location: 134874-135269 bp Feature: gene Location: 138869-139852 bp Ori: KMQ32252.1 Feature: domain Description: rpsA Location: 139136-139673 bp Feature: domain Description: rpsA Location: 139136-139673 bp Feature: gene Location: 140342-140836 bp Ori: KMQ32253.1 Feature: domain Description: DUF2716 Location: 140363-140780 bp Feature: domain Description: DUF2716 Location: 140363-140780 bp Feature: gene Location: 141471-143117 bp Ori: KMQ32254.1 Feature: domain Description: RVT_N Location: 141513-141750 bp Feature: domain Description: RVT_N Location: 1415 13-14175 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141804-142464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 141804-142464 bp Feature: domain Description: GIIM Note: maturase Location: 142533-142764 bp Feature: domain Description: GIIM Note: maturase Location: 1425 33-142764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), DEXDc (smart00487), MTS (pfam05175), DUF1837 (pfam08878), HEPN (smart00748), NT_KNTase_like (cd05403), Intron_maturas2 (pfam01348), E1_enzyme_family (cl22428), Prok-E2_D (pfam14460)
beta_clamp (cl29549), COG4712 (Uncharacterized protein ), rpsA (TIGR00717), DUF2716 (pfam10898), RVT_N (pfam13655), GIIM (pfam08388)

Seq: LABH01000051.1 Bacillus cereus strain INRA A3 268, whole genome shotgun sequence (153271 bp)
Overview 1 RT 1: 116-3830 bp Neighborhood of RT #1 [116, 3850] RVT_N RVT-GII GIIM DinB_2 Feature: gene Location: 116-1762 bp Ori: KMQ24619.1 Feature: domain Description: RVT_N Location: 158-395 bp Feature: domain Description: RVT_N Location: 158-395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-1109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 449-1109 bp Feature: domain Description: GIIM Note: maturase Location: 1178-1409 bp Feature: domain Description: GIIM Note: maturase Location: 1178-1409 bp Feature: gene Location: 2464-2817 bp Feature: gene Location: 3341-3850 bp Ori: KMQ24621.1 Feature: domain Description: DinB_2 Location: 3440-3830 bp Feature: domain Description: DinB_2 Location: 3440-3830 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DinB_2 (pfam12867)

Seq: LABH01000058.1 Bacillus cereus strain INRA A3 275, whole genome shotgun sequence (53694 bp)
Overview 1 RT 1: 592-4526 bp Neighborhood of RT #1 [592, 4526] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 592-2415 bp Ori: KMQ22697.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 856-1687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 856-1687 bp Feature: domain Description: Intron_maturas2 Location: 1762-2062 bp Feature: domain Description: Intron_maturas2 Location: 17 62-2062 bp Feature: domain Description: HNHc Note: nucleases Location: 2236-2389 bp Feature: domain Description: HNHc Note: nucleases Location: 2236-2389 bp Feature: gene Location: 3030-3608 bp Feature: gene Location: 3630-4526 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: LABH01000052.1 Bacillus cereus strain INRA A3 269, whole genome shotgun sequence (113984 bp)
Overview 1 RT 1: 614-6376 bp 2 RT 2: 54424-75610 bp Neighborhood of RT #1 [614, 6376] RVT_N RVT-GII GIIM TraG-D_C Ftsk_gamma Ftsk_gamma Neighborhood of RT #2 [54424, 75669] LPD1 RVT-GII HNHc T_den_put_tspse PrgI RVT-GII HNHc CwlT_like NlpD Spr Feature: gene Location: 614-2260 bp Ori: KMQ24410.1 Feature: domain Description: RVT_N Location: 656-893 bp Feature: domain Description: RVT_N Location: 656-8 93 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 947-1607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 947-1607 bp Feature: domain Description: GIIM Note: maturase Location: 1676-1907 bp Feature: domain Description: GIIM Note: maturase Location: 1676-1907 bp Feature: gene Location: 2472-5972 bp Ori: KMQ24411.1 Feature: domain Description: TraG-D_C Location: 4089-4449 bp Feature: domain Description: TraG-D_C Location: 408 9-4449 bp Feature: domain Description: Ftsk_gamma Location: 4857-5034 bp Feature: domain Description: Ftsk_gamma Location: 48 57-5034 bp Feature: domain Description: Ftsk_gamma Location: 5166-5310 bp Feature: domain Description: Ftsk_gamma Location: 5166-5310 bp Feature: gene Location: 5990-6376 bp Feature: gene Location: 54424-54975 bp Feature: gene Location: 55088-56863 bp Ori: KMQ24460.1 Feature: domain Description: LPD1 Location: 56612-56807 bp Feature: domain Description: LPD1 Location: 56612-568 07 bp Feature: gene Location: 58119-60002 bp Ori: KMQ24461.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58440-59178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58 440-59178 bp Feature: domain Description: HNHc Note: nucleases Location: 59736-59883 bp Feature: domain Description: HNHc Note: nucleases Location: 59736-598 8 3 bp Feature: gene Location: 61438-62361 bp Ori: KMQ24462.1 Feature: domain Description: T_den_put_tspse Location: 61480-62344 bp Feature: domain Description: T_den_put_tspse Location: 6148 0-62344 bp Feature: gene Location: 62570-62758 bp Feature: gene Location: 63394-63744 bp Ori: KMQ24465.1 Feature: domain Description: PrgI Location: 63412-63697 bp Feature: domain Description: PrgI Location: 63412-63697 bp Feature: gene Location: 63745-64659 bp Feature: gene Location: 66362-68194 bp Ori: KMQ24467.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66662-67367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66662-67367 bp Feature: domain Description: HNHc Note: nucleases Location: 67946-68078 bp Feature: domain Description: HNHc Note: nucleases Location: 67946-68 078 bp Feature: gene Location: 69485-73465 bp Feature: gene Location: 73462-75669 bp Ori: KMQ24469.1 Feature: domain Description: CwlT_like Location: 74311-74785 bp Feature: domain Description: CwlT_like Location: 74311-7478 5 bp Feature: domain Description: NlpD Location: 74815-75238 bp Feature: domain Description: NlpD Location: 748 15-75238 bp Feature: domain Description: Spr Location: 75280-75610 bp Feature: domain Description: Spr Location: 7528 0-75610 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), Ftsk_gamma (smart00843), LPD1 (pfam18796), HNHc (smart00507), T_den_put_tspse (TIGR01784), PrgI (pfam12666), CwlT_like
NlpD (COG0739), Spr (COG0791)

Seq: LABH01000034.1 Bacillus cereus strain INRA A3 249, whole genome shotgun sequence (8438 bp)
Overview 1 RT 1: 664-8438 bp Neighborhood of RT #1 [664, 8438] TraC-F-type TraC-F-type RVT-GII Intron_maturas2 HNHc Feature: gene Location: 664-1473 bp Feature: gene Location: 1489-3426 bp Ori: KMQ27337.1 Feature: domain Description: TraC-F-type Location: 2206-2449 bp Feature: domain Description: TraC-F-type Location: 2206-2449 bp Feature: domain Description: TraC-F-type Location: 3001-3331 bp Feature: domain Description: TraC-F-type Location: 3001-3331 bp Feature: gene Location: 4664-6487 bp Ori: KMQ27338.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4928-5759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49 28-5759 bp Feature: domain Description: Intron_maturas2 Location: 5834-6134 bp Feature: domain Description: Intron_maturas2 Location: 5834-6134 bp Feature: domain Description: HNHc Note: nucleases Location: 6308-6461 bp Feature: domain Description: HNHc Note: nucleases Location: 6308-6461 bp Feature: gene Location: 7102-7680 bp Feature: gene Location: 7702-8438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: LABH01000039.1 Bacillus cereus strain INRA A3 255, whole genome shotgun sequence (8441 bp)
Overview 1 RT 1: 667-8441 bp Neighborhood of RT #1 [667, 8441] VirB4 TraC-F-type TraC-F-type RVT-GII Intron_maturas2 HNHc Feature: gene Location: 667-1476 bp Feature: gene Location: 1492-3429 bp Ori: KMQ26543.1 Feature: domain Description: VirB4 Location: 1651-1996 bp Feature: domain Description: VirB4 Location: 1651-1996 bp Feature: domain Description: TraC-F-type Location: 2209-2443 bp Feature: domain Description: TraC-F-type Location: 2209-2443 bp Feature: domain Description: TraC-F-type Location: 3010-3334 bp Feature: domain Description: TraC-F-type Location: 3010 -3334 bp Feature: gene Location: 4667-6490 bp Ori: KMQ26544.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4931-5762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4931-5762 bp Feature: domain Description: Intron_maturas2 Location: 5837-6137 bp Feature: domain Description: Intron_maturas2 Location: 5837-6137 bp Feature: domain Description: HNHc Note: nucleases Location: 6311-6464 bp Feature: domain Description: HNHc Note: nucleases Location: 6311-6464 bp Feature: gene Location: 7105-7683 bp Feature: gene Location: 7705-8441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), TraC-F-type (TIGR02746), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)