myRT

myRT report for GCA_001049915.1_Drancourtella_massiliensis

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Seq: CVPG01000007.1 Ruminococcaceae bacterium GD1 genome assembly Drancourtella massiliensis, contig contig00007, whole genome shotgun sequence (1516323 bp)
Overview 1 RT 1: 915942-918801 bp 2 RT 2: 942182-947593 bp 3 RT 3: 1097563-1102081 bp 4 RT 4: 1272599-1277510 bp 5 RT 5: 1483796-1489786 bp Neighborhood of RT #1 [915942, 918801] PhdYeFM_antitox RVT-GII GIIM Neighborhood of RT #2 [942182, 947637] MFS_1 PepP RVT-GII GIIM DUF5301 Neighborhood of RT #3 [1097563, 1102101] glyA dut RVT-GII GIIM PhnK Neighborhood of RT #4 [1272599, 1277518] OmpR M20_peptT RVT-GII GIIM YitT Neighborhood of RT #5 [1483796, 1489848] IMPACT_YIGZ MrcB MrcB RVT-GII GIIM RAYT Feature: gene Location: 915942-916229 bp Feature: domain Description: PhdYeFM_antitox Location: 915945-916137 bp Feature: domain Description: PhdYeFM_antitox Location: 91 5945-91 61 37 bp Feature: gene Location: 916338-916580 bp Feature: gene Location: 916671-917756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916899-917520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 6899-91 7520 bp Feature: domain Description: GIIM Note: maturase Location: 917571-917748 bp Feature: domain Description: GIIM Note: maturase Location: 91 7571 -91 7748 bp Feature: gene Location: 918143-918295 bp Feature: gene Location: 918310-918801 bp Feature: gene Location: 942182-943495 bp Feature: domain Description: MFS_1 Location: 942284-943265 bp Feature: domain Description: MFS_1 Location: 942284-943265 bp Feature: gene Location: 943535-944614 bp Feature: domain Description: PepP Location: 943541-944609 bp Feature: domain Description: PepP Location: 943541 -944609 bp Feature: gene Location: 944851-946134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 945061-945676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 945061 -945676 bp Feature: domain Description: GIIM Note: maturase Location: 945736-945955 bp Feature: domain Description: GIIM Note: maturase Location: 945736-945955 bp Feature: gene Location: 946121-946264 bp Feature: gene Location: 947209-947637 bp Feature: domain Description: DUF5301 Location: 947308-947593 bp Feature: domain Description: DUF5301 Location: 947308-947593 bp Feature: gene Location: 1097563-1098810 bp Feature: domain Description: glyA Location: 1097587-1098808 bp Feature: domain Description: glyA Location: 1 097587-1 098808 bp Feature: gene Location: 1098829-1099335 bp Feature: domain Description: dut Location: 1098931-1099330 bp Feature: domain Description: dut Location: 1 098931 -1 099330 bp Feature: gene Location: 1099505-1100788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099715-1100330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 09971 5-1 1 00330 bp Feature: domain Description: GIIM Note: maturase Location: 1100390-1100609 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 00390-1 1 00609 bp Feature: gene Location: 1100775-1100918 bp Feature: gene Location: 1101328-1102101 bp Feature: domain Description: PhnK Location: 1101331-1102081 bp Feature: domain Description: PhnK Location: 1 1 01 331 -1 1 02081 bp Feature: gene Location: 1272599-1273273 bp Feature: domain Description: OmpR Location: 1272608-1273262 bp Feature: domain Description: OmpR Location: 1 272608-1 273262 bp Feature: gene Location: 1273439-1274659 bp Feature: domain Description: M20_peptT Location: 1273451-1274639 bp Feature: domain Description: M20_peptT Location: 1 273451 -1 274639 bp Feature: gene Location: 1274747-1276030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274957-1275572 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 274957-1 275572 bp Feature: domain Description: GIIM Note: maturase Location: 1275632-1275851 bp Feature: domain Description: GIIM Note: maturase Location: 1 275632-1 275851 bp Feature: gene Location: 1276017-1276160 bp Feature: gene Location: 1276583-1277518 bp Feature: domain Description: YitT Location: 1276664-1277510 bp Feature: domain Description: YitT Location: 1 276664-1 27751 0 bp Feature: gene Location: 1483796-1484452 bp Feature: domain Description: IMPACT_YIGZ Location: 1483808-1484390 bp Feature: domain Description: IMPACT_YIGZ Location: 1 483808-1 484390 bp Feature: gene Location: 1484610-1487192 bp Feature: domain Description: MrcB Location: 1484658-1485804 bp Feature: domain Description: MrcB Location: 1 484658-1 485804 bp Feature: domain Description: MrcB Location: 1485891-1487148 bp Feature: domain Description: MrcB Location: 1 485891 -1 4871 48 bp Feature: gene Location: 1487325-1488608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1487535-1488150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 487535-1 4881 50 bp Feature: domain Description: GIIM Note: maturase Location: 1488210-1488429 bp Feature: domain Description: GIIM Note: maturase Location: 1 48821 0-1 488429 bp Feature: gene Location: 1488595-1488738 bp Feature: gene Location: 1489237-1489848 bp Feature: domain Description: RAYT Location: 1489405-1489786 bp Feature: domain Description: RAYT Location: 1 489405-1 489786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), RVT-GII, GIIM (pfam08388), MFS_1 (pfam07690), PepP (COG0006), DUF5301 (pfam17225), glyA (PRK00011), dut (TIGR00576), PhnK (COG4107), OmpR (COG0745)
M20_peptT (cd03892), YitT (COG1284), IMPACT_YIGZ (TIGR00257), MrcB (COG0744), RAYT (COG1943)