myRT

myRT report for GCA_001050305.1_ASM105030v1

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Seq: KQ130539.1 Listeria newyorkensis strain 1903 genomic scaffold Scaffold_8, whole genome shotgun sequence (108251 bp)
Overview 1 RT 1: 25078-31618 bp Neighborhood of RT #1 [25078, 31618] RVT-Retrons Trypsin_2 GW GW PLA2_plant Feature: gene Location: 25078-25476 bp Feature: gene Location: 25695-26183 bp Feature: gene Location: 26461-28203 bp Ori: KMT62889.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26596-27181 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 26596-271 81 bp Feature: domain Description: Trypsin_2 Location: 27613-28090 bp Feature: domain Description: Trypsin_2 Location: 2761 3-28090 bp Feature: gene Location: 28743-30632 bp Ori: KMT62890.1 Feature: domain Description: GW Location: 28857-29091 bp Feature: domain Description: GW Location: 28857-29091 bp Feature: domain Description: GW Location: 29124-29352 bp Feature: domain Description: GW Location: 291 24-29352 bp Feature: domain Description: PLA2_plant Location: 30390-30576 bp Feature: domain Description: PLA2_plant Location: 30390-30576 bp Feature: gene Location: 31469-31618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365), GW, PLA2_plant (cd04706)

Seq: KQ130593.1 Listeria newyorkensis strain 1903 genomic scaffold Scaffold_28, whole genome shotgun sequence (278573 bp)
Overview 1 RT 1: 227454-234804 bp Neighborhood of RT #1 [227454, 234806] NrnA RVT-Retrons WYL dnaE Feature: gene Location: 227454-228383 bp Ori: KMT59094.1 Feature: domain Description: NrnA Location: 227460-228378 bp Feature: domain Description: NrnA Location: 2 2 7460-2 2 8378 bp Feature: gene Location: 228472-229680 bp Feature: gene Location: 229883-230881 bp Ori: KMT59096.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 230090-230636 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 30090-2 30636 bp Feature: gene Location: 231044-231379 bp Ori: KMT59097.1 Feature: domain Description: WYL Location: 231101-231362 bp Feature: domain Description: WYL Location: 2 31101-2 31362 bp Feature: gene Location: 231483-234806 bp Ori: KMT59098.1 Feature: domain Description: dnaE Location: 231486-234804 bp Feature: domain Description: dnaE Location: 2 31486-2 34804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NrnA (COG0618), RVT-Retrons, WYL (pfam13280), dnaE (PRK07374)