myRT

myRT report for GCA_001050635.1_ASM105063v1

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Seq: CANV01000046.1 Vibrio nigripulchritudo ENn2 WGS project CANV00000000 data, contig ASP_2411_38, whole genome shotgun sequence (95436 bp)
Overview 1 RT 1: 18765-31784 bp Neighborhood of RT #1 [18765, 32122] WGR_DNA_ligase RVT-Retrons SpoIVFB TPR Peptidase_C39A PEP_TPR_lipo TPR TPR TPR TPR TPR TPR Fis1 Feature: gene Location: 18765-21863 bp Ori: CCN94387.1 Feature: domain Description: WGR_DNA_ligase Location: 18783-19011 bp Feature: domain Description: WGR_DNA_ligase Location: 1 8783-1 901 1 bp Feature: gene Location: 21860-23515 bp Feature: gene Location: 23924-25774 bp Ori: CCN94389.1 Gene: ret Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24527-25142 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 24527-251 42 bp Feature: gene Location: 25832-26911 bp Ori: CCN94390.1 Feature: domain Description: SpoIVFB Location: 26159-26837 bp Feature: domain Description: SpoIVFB Location: 261 59-26837 bp Feature: gene Location: 27149-32122 bp Ori: CCN94391.1 Feature: domain Description: TPR Location: 27809-28001 bp Feature: domain Description: TPR Location: 27809-28001 bp Feature: domain Description: Peptidase_C39A Location: 28094-28418 bp Feature: domain Description: Peptidase_C39A Location: 28094-2841 8 bp Feature: domain Description: PEP_TPR_lipo Location: 28985-29285 bp Feature: domain Description: PEP_TPR_lipo Location: 28985-29285 bp Feature: domain Description: TPR Location: 29366-29621 bp Feature: domain Description: TPR Location: 29366-29621 bp Feature: domain Description: TPR Location: 29648-29960 bp Feature: domain Description: TPR Location: 29648-29960 bp Feature: domain Description: TPR Location: 30011-30236 bp Feature: domain Description: TPR Location: 3001 1 -30236 bp Feature: domain Description: TPR Location: 30263-30482 bp Feature: domain Description: TPR Location: 30263-30482 bp Feature: domain Description: TPR Location: 30587-30866 bp Feature: domain Description: TPR Location: 30587-30866 bp Feature: domain Description: TPR Location: 30902-31139 bp Feature: domain Description: TPR Location: 30902-31 1 39 bp Feature: domain Description: Fis1 Location: 31691-31784 bp Feature: domain Description: Fis1 Location: 31 691 -31 784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), RVT-Retrons, SpoIVFB (COG1994), TPR (smart00028), Peptidase_C39A (cd02549), PEP_TPR_lipo (TIGR02917), Fis1 (cl21750)