myRT

myRT report for GCA_001051535.1_ASM105153v1

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Seq: APGS01000110.1 Salmonella enterica subsp. enterica serovar Newport str. 36805 SEEN6805_65, whole genome shotgun sequence (399778 bp)
Overview 1 RT 1: 83600-90152 bp Neighborhood of RT #1 [83600, 90154] PRK09678 RVT-UG8 Tra5 DUF1889 Feature: gene Location: 83600-83872 bp Ori: KMT74016.1 Feature: domain Description: PRK09678 Location: 83609-83765 bp Feature: domain Description: PRK09678 Location: 83609-83765 bp Feature: gene Location: 84902-85537 bp Feature: gene Location: 85528-87546 bp Ori: KMT74018.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 86101-86554 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 861 01 -86554 bp Feature: gene Location: 88226-89089 bp Ori: KMT74019.1 Feature: domain Description: Tra5 Location: 88379-89084 bp Feature: domain Description: Tra5 Location: 88379-89084 bp Feature: gene Location: 89855-90154 bp Ori: KMT74020.1 Feature: domain Description: DUF1889 Location: 89858-90152 bp Feature: domain Description: DUF1 889 Location: 89858-901 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG8, Tra5 (COG2801), DUF1889 (pfam08986)

Seq: APGS01000066.1 Salmonella enterica subsp. enterica serovar Newport str. 36805 SEEN6805_21, whole genome shotgun sequence (81002 bp)
Overview 1 RT 1: 29625-36457 bp Neighborhood of RT #1 [29625, 36465] trmE INT_P4_C RVT-Retrons PRK10473 Feature: gene Location: 29625-30989 bp Ori: KMT77953.1 Gene: trmE Feature: domain Description: trmE Location: 29628-30987 bp Feature: domain Description: trmE Location: 2 962 8-30987 bp Feature: gene Location: 31667-32089 bp Ori: KMT77954.1 Feature: domain Description: INT_P4_C Location: 31673-32021 bp Feature: domain Description: INT_P4_C Location: 31673-32 02 1 bp Feature: gene Location: 32171-33103 bp Ori: KMT77955.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32327-32870 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 32 7-32 870 bp Feature: gene Location: 33429-34298 bp Feature: gene Location: 35278-36465 bp Ori: KMT77957.1 Feature: domain Description: PRK10473 Location: 35281-36457 bp Feature: domain Description: PRK10473 Location: 352 81-36457 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT trmE (PRK05291), INT_P4_C (cd00801), RVT-Retrons, PRK10473 (MdtL family multidrug efflux MFS transporter)