myRT

myRT report for GCA_001052125.1_ASM105212v1

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Seq: JWCY01000109.1 Escherichia coli strain 11_ECOL 1303_47251_801079_1138+,290+, whole genome shotgun sequence (47251 bp)
Overview 1 RT 1: 43029-47100 bp Neighborhood of RT #1 [43029, 47249] HTH_29 HTH_33 DDE_3 RVT-AbiP2 PRK09183 COG4584 Feature: gene Location: 43029-43319 bp Feature: gene Location: 43329-44390 bp Feature: domain Description: HTH_29 Location: 43449-43620 bp Feature: domain Description: HTH_29 Location: 43449-43620 bp Feature: domain Description: HTH_33 Location: 43653-43815 bp Feature: domain Description: HTH_33 Location: 43653-4381 5 bp Feature: domain Description: DDE_3 Location: 43857-44286 bp Feature: domain Description: DDE_3 Location: 43857-44286 bp Feature: gene Location: 44492-45862 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 44753-45209 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 44753-45209 bp Feature: gene Location: 45901-46680 bp Feature: domain Description: PRK09183 Location: 45907-46678 bp Feature: domain Description: PRK091 83 Location: 45907-46678 bp Feature: gene Location: 46680-47249 bp Feature: domain Description: COG4584 Location: 46683-47100 bp Feature: domain Description: COG4584 Location: 46683-471 00 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )