myRT

myRT report for GCA_001052395.1_ASM105239v1

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Seq: JVZH01000347.1 Enterococcus faecium strain 1197_EFCM 1444_30527_266600, whole genome shotgun sequence (30527 bp)
Overview 1 RT 1: 749-6598 bp Neighborhood of RT #1 [749, 6621] PRK06019 Adenylsuccinate_lyase_1 RVT-GII GIIM PRK09362 Feature: gene Location: 749-1873 bp Feature: domain Description: PRK06019 Location: 773-1862 bp Feature: domain Description: PRK0601 9 Location: 773-1 862 bp Feature: gene Location: 1886-3181 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1898-3167 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 1 898-31 67 bp Feature: gene Location: 3303-4691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3624-4239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3624-4239 bp Feature: domain Description: GIIM Note: maturase Location: 4296-4512 bp Feature: domain Description: GIIM Note: maturase Location: 4296-451 2 bp Feature: gene Location: 5260-5637 bp Feature: gene Location: 5893-6621 bp Feature: domain Description: PRK09362 Location: 5896-6598 bp Feature: domain Description: PRK09362 Location: 5896-6598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed), Adenylsuccinate_lyase_1 (cd01360), RVT-GII, GIIM (pfam08388), PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed)

Seq: JVZH01000448.1 Enterococcus faecium strain 1197_EFCM 1829_3288_73404_715_,...,777+, whole genome shotgun sequence (3288 bp)
Overview 1 RT 1: 721-3275 bp Neighborhood of RT #1 [721, 3286] RVT-GII HNHc ArdA Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Feature: gene Location: 2819-2959 bp Feature: gene Location: 2972-3286 bp Feature: domain Description: ArdA Location: 2990-3275 bp Feature: domain Description: ArdA Location: 2 990-32 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: JVZH01000456.1 Enterococcus faecium strain 1197_EFCM 1840_15868_3136977_821+,...,1732_, whole genome shotgun sequence (15868 bp)
Overview 1 RT 1: 7-4473 bp Neighborhood of RT #1 [7, 4473] HsdM RVT-AbiP2 Tra8 Feature: gene Location: 7-1485 bp Feature: domain Description: HsdM Location: 28-1453 bp Feature: domain Description: HsdM Location: 28-1453 bp Feature: gene Location: 1823-3298 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2171-2636 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2171-263 6 bp Feature: gene Location: 3276-4229 bp Feature: domain Description: Tra8 Location: 3279-4206 bp Feature: domain Description: Tra8 Location: 3 279-4206 bp Feature: gene Location: 4312-4473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2, Tra8 (COG2826)

Seq: JVZH01000068.1 Enterococcus faecium strain 1197_EFCM 296_25004_387669, whole genome shotgun sequence (25004 bp)
Overview 1 RT 1: 2076-7350 bp Neighborhood of RT #1 [2076, 8042] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 2076-3275 bp Feature: domain Description: Glucosaminidase Location: 2346-2742 bp Feature: domain Description: Glucosaminidase Location: 234 6-274 2 bp Feature: domain Description: Peptidase_M23 Location: 2919-3156 bp Feature: domain Description: Peptidase_M23 Location: 2919-3156 bp Feature: gene Location: 3275-3595 bp Feature: gene Location: 3783-5660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4098-4836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 098-4 836 bp Feature: domain Description: HNHc Note: nucleases Location: 5394-5547 bp Feature: domain Description: HNHc Note: nucleases Location: 5394 -554 7 bp Feature: gene Location: 5847-6080 bp Feature: gene Location: 6348-8042 bp Feature: domain Description: VirB4 Location: 6666-7350 bp Feature: domain Description: VirB4 Location: 6666-7350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: JVZH01000231.1 Enterococcus faecium strain 1197_EFCM 974_2999_34587, whole genome shotgun sequence (2999 bp)
Overview 1 RT 1: 1-2948 bp Neighborhood of RT #1 [1, 2998] RVT-GII HNHc FtsK Feature: gene Location: 1-126 bp Feature: gene Location: 720-2594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1086-1782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1086-1782 bp Feature: domain Description: HNHc Note: nucleases Location: 2322-2481 bp Feature: domain Description: HNHc Note: nucleases Location: 2322-2481 bp Feature: gene Location: 2696-2998 bp Feature: domain Description: FtsK Location: 2708-2948 bp Feature: domain Description: FtsK Location: 2708-2948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK (COG1674)