myRT

myRT report for GCA_001052435.1_ASM105243v1

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Seq: JVYZ01000037.1 Enterococcus faecium strain 1203_EFCM 152_30302_302915, whole genome shotgun sequence (30302 bp)
Overview 1 RT 1: 23907-29768 bp Neighborhood of RT #1 [23907, 29779] PRK09362 RVT-GII GIIM Adenylsuccinate_lyase_1 PRK06019 Feature: gene Location: 23907-24635 bp Feature: domain Description: PRK09362 Location: 23910-24612 bp Feature: domain Description: PRK09362 Location: 2391 0-2461 2 bp Feature: gene Location: 24891-25268 bp Feature: gene Location: 25837-27225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26158-26773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261 58-26773 bp Feature: domain Description: GIIM Note: maturase Location: 26830-27046 bp Feature: domain Description: GIIM Note: maturase Location: 26830-27046 bp Feature: gene Location: 27347-28642 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 27359-28628 bp Feature: domain Description: Adenylsuccinate_lyase_1 Location: 27359-28628 bp Feature: gene Location: 28655-29779 bp Feature: domain Description: PRK06019 Location: 28679-29768 bp Feature: domain Description: PRK0601 9 Location: 28679-29768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), RVT-GII, GIIM (pfam08388), Adenylsuccinate_lyase_1 (cd01360), PRK06019 (phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed)

Seq: JVYZ01000414.1 Enterococcus faecium strain 1203_EFCM 1818_3288_80682_699_,...,769+, whole genome shotgun sequence (3288 bp)
Overview 1 RT 1: 721-3275 bp Neighborhood of RT #1 [721, 3286] RVT-GII HNHc ArdA Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 2 347-2 512 bp Feature: gene Location: 2819-2959 bp Feature: gene Location: 2972-3286 bp Feature: domain Description: ArdA Location: 2990-3275 bp Feature: domain Description: ArdA Location: 2 990-32 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), ArdA (pfam07275)

Seq: JVYZ01000433.1 Enterococcus faecium strain 1203_EFCM 1840_3458_720996_1532+,...,1595+, whole genome shotgun sequence (3458 bp)
Overview 1 RT 1: 3-3428 bp Neighborhood of RT #1 [3, 3457] RVT-AbiP2 HsdM Rve Feature: gene Location: 3-1466 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 339-804 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 3 9-804 bp Feature: gene Location: 1804-3282 bp Feature: domain Description: HsdM Location: 1825-3250 bp Feature: domain Description: HsdM Location: 1825-3 250 bp Feature: gene Location: 3305-3457 bp Feature: domain Description: Rve Location: 3311-3428 bp Feature: domain Description: Rve Location: 3 3 11-3 428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286), Rve (COG3316)

Seq: JVYZ01000066.1 Enterococcus faecium strain 1203_EFCM 304_25004_417441, whole genome shotgun sequence (25004 bp)
Overview 1 RT 1: 2076-7350 bp Neighborhood of RT #1 [2076, 8042] Glucosaminidase Peptidase_M23 RVT-GII HNHc VirB4 Feature: gene Location: 2076-3275 bp Feature: domain Description: Glucosaminidase Location: 2346-2742 bp Feature: domain Description: Glucosaminidase Location: 234 6-274 2 bp Feature: domain Description: Peptidase_M23 Location: 2919-3156 bp Feature: domain Description: Peptidase_M23 Location: 2919-3156 bp Feature: gene Location: 3275-3595 bp Feature: gene Location: 3783-5660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4098-4836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 098-4 836 bp Feature: domain Description: HNHc Note: nucleases Location: 5394-5547 bp Feature: domain Description: HNHc Note: nucleases Location: 5394 -554 7 bp Feature: gene Location: 5847-6080 bp Feature: gene Location: 6348-8042 bp Feature: domain Description: VirB4 Location: 6666-7350 bp Feature: domain Description: VirB4 Location: 6666-7350 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: JVYZ01000200.1 Enterococcus faecium strain 1203_EFCM 963_2999_42386, whole genome shotgun sequence (2999 bp)
Overview 1 RT 1: 1-2948 bp Neighborhood of RT #1 [1, 2998] RVT-GII HNHc FtsK Feature: gene Location: 1-126 bp Feature: gene Location: 720-2594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1086-1782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1086-1782 bp Feature: domain Description: HNHc Note: nucleases Location: 2322-2481 bp Feature: domain Description: HNHc Note: nucleases Location: 2322-2481 bp Feature: gene Location: 2696-2998 bp Feature: domain Description: FtsK Location: 2708-2948 bp Feature: domain Description: FtsK Location: 2708-2948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK (COG1674)