myRT

myRT report for GCA_001052595.1_ASM105259v1

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Seq: JWGW01000139.1 Enterobacter cloacae strain 10_ECLO 1845_7746_144309_508+,...,1010_, whole genome shotgun sequence (7746 bp)
Overview 1 RT 1: 2915-7295 bp Neighborhood of RT #1 [2915, 7687] SbcB dacD RVT-GII Feature: gene Location: 2915-4339 bp Feature: domain Description: SbcB Location: 2921-4337 bp Feature: domain Description: SbcB Location: 2921 -4337 bp Feature: gene Location: 4514-5683 bp Feature: domain Description: dacD Location: 4523-5678 bp Feature: domain Description: dacD Location: 4523-5678 bp Feature: gene Location: 6200-7687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6605-7295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6605-7295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), dacD (PRK11397), RVT-GII

Seq: JWGW01000143.1 Enterobacter cloacae strain 10_ECLO 1849_99426_1527455_536+,...,1299+, whole genome shotgun sequence (99426 bp)
Overview 1 RT 1: 44642-49755 bp Neighborhood of RT #1 [44642, 49775] traC_PFL_4706 RVT-UG2 HTH_XRE HTH_XRE Feature: gene Location: 44642-47272 bp Feature: domain Description: traC_PFL_4706 Location: 44681-47261 bp Feature: domain Description: traC_PFL_4706 Location: 44681-472 61 bp Feature: gene Location: 47412-47612 bp Feature: gene Location: 47760-49037 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 47958-48744 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 47958-48744 bp Feature: gene Location: 49235-49462 bp Feature: domain Description: HTH_XRE Location: 49277-49439 bp Feature: domain Description: HTH_XRE Location: 492 77-49439 bp Feature: gene Location: 49545-49775 bp Feature: domain Description: HTH_XRE Location: 49587-49755 bp Feature: domain Description: HTH_XRE Location: 49587-49755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT traC_PFL_4706 (TIGR03744), RVT-UG2, HTH_XRE (smart00530)

Seq: JWGW01000152.1 Enterobacter cloacae strain 10_ECLO 1858_21776_292089_691+,...,1010_, whole genome shotgun sequence (21810 bp)
Overview 1 RT 1: 19408-21359 bp Neighborhood of RT #1 [19408, 21751] DinI RVT-GII Feature: gene Location: 19408-19650 bp Feature: domain Description: DinI Location: 19459-19639 bp Feature: domain Description: DinI Location: 19459-1963 9 bp Feature: gene Location: 19665-19811 bp Feature: gene Location: 20264-21751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20669-21359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20669-213 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII

Seq: JWGW01000175.1 Enterobacter cloacae strain 10_ECLO 1883_3237_90777_1010+,475+, whole genome shotgun sequence (3237 bp)
Overview 1 RT 1: 60-2358 bp Neighborhood of RT #1 [60, 3080] RVT-GII HNH_5 Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 65-1155 bp Feature: gene Location: 1572-1997 bp Feature: gene Location: 2280-3080 bp Feature: domain Description: HNH_5 Location: 2298-2358 bp Feature: domain Description: HNH_5 Location: 2298-2358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNH_5 (pfam14279)

Seq: JWGW01000176.1 Enterobacter cloacae strain 10_ECLO 1884_24528_351922_1010_,517+, whole genome shotgun sequence (24528 bp)
Overview 1 RT 1: 2-2470 bp Neighborhood of RT #1 [2, 2493] RVT-GII PRK10276 umuC Feature: gene Location: 2-214 bp Feature: gene Location: 368-1855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1463 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773-1463 bp Feature: gene Location: 1934-2353 bp Feature: domain Description: PRK10276 Location: 1937-2348 bp Feature: domain Description: PRK10276 Location: 1937-2348 bp Feature: gene Location: 2356-2493 bp Feature: domain Description: umuC Location: 2359-2470 bp Feature: domain Description: umuC Location: 235 9-2470 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: JWGW01000181.1 Enterobacter cloacae strain 10_ECLO 1889_14910_236901_1053_,520+,1010+, whole genome shotgun sequence (14910 bp)
Overview 1 RT 1: 11344-14909 bp Neighborhood of RT #1 [11344, 14909] YccC PRK10016 RVT-GII Feature: gene Location: 11344-12402 bp Feature: domain Description: YccC Location: 11350-12388 bp Feature: domain Description: YccC Location: 11350-12388 bp Feature: gene Location: 12501-12974 bp Feature: domain Description: PRK10016 Location: 12504-12963 bp Feature: domain Description: PRK10016 Location: 12504-1296 3 bp Feature: gene Location: 13056-14543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13461-14151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1346 1-14151 bp Feature: gene Location: 14697-14909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII