myRT

myRT report for GCA_001052605.1_ASM105260v1

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Seq: JWGT01000084.1 Enterobacter roggenkampii strain 1001_ECLO 371_1909_85835, whole genome shotgun sequence (1909 bp)
Overview 1 RT 1: 59-1906 bp Neighborhood of RT #1 [59, 1906] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1 1 54 bp Feature: gene Location: 1700-1906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JWGT01000187.1 Enterobacter roggenkampii strain 1001_ECLO 803_20759_489413, whole genome shotgun sequence (20759 bp)
Overview 1 RT 1: 1-4010 bp Neighborhood of RT #1 [1, 4018] RVT-UG17 YadS Feature: gene Location: 1-555 bp Feature: gene Location: 1487-2167 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1715-2105 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1715-2 105 bp Feature: gene Location: 3154-3303 bp Feature: gene Location: 3401-4018 bp Feature: domain Description: YadS Location: 3404-4010 bp Feature: domain Description: YadS Location: 3404-4010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, YadS (COG2860)

Seq: JWGT01000228.1 Enterobacter roggenkampii strain 1001_ECLO 941_2297_53039, whole genome shotgun sequence (2297 bp)
Overview 1 RT 1: 1-2297 bp Neighborhood of RT #1 [1, 2296] RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 1-348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-3 46 bp Feature: gene Location: 860-2296 bp Feature: domain Description: LZ_Tnp_IS66 Location: 956-1169 bp Feature: domain Description: LZ_Tnp_IS66 Location: 956-1169 bp Feature: domain Description: zf-IS66 Location: 1193-1322 bp Feature: domain Description: zf-IS66 Location: 1193 -13 22 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1367-2222 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13 67-2222 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2243-2297 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2243 -2297 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817)

Seq: JWGT01000235.1 Enterobacter roggenkampii strain 1001_ECLO 970_1310_50487_413+,743+,517+, whole genome shotgun sequence (1310 bp)
Overview 1 RT 1: 93-1261 bp Neighborhood of RT #1 [93, 1308] group_II_RT_mat RVT-GII Feature: gene Location: 93-665 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 99-411 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 99-4 11 bp Feature: gene Location: 658-1308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661-1261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 661-1261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII