myRT

myRT report for GCA_001052795.1_ASM105279v1

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Seq: JWCM01000426.1 Klebsiella oxytoca strain 112_KOXY 1764_9964_385776, whole genome shotgun sequence (9964 bp)
Overview 1 RT 1: 5222-9962 bp Neighborhood of RT #1 [5222, 9962] VirB4 RVT-GII HNHc Feature: gene Location: 5222-6916 bp Feature: domain Description: VirB4 Location: 5540-6224 bp Feature: domain Description: VirB4 Location: 5540-6224 bp Feature: gene Location: 7184-7417 bp Feature: gene Location: 7604-9481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7919-8657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 791 9-8657 bp Feature: domain Description: HNHc Note: nucleases Location: 9215-9368 bp Feature: domain Description: HNHc Note: nucleases Location: 921 5-9368 bp Feature: gene Location: 9669-9962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507)

Seq: JWCM01001108.1 Klebsiella oxytoca strain 112_KOXY 4385_3287_119538, whole genome shotgun sequence (3287 bp)
Overview 1 RT 1: 3-3256 bp Neighborhood of RT #1 [3, 3285] RVT-AbiP2 HsdM Feature: gene Location: 3-1472 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 345-810 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 345-810 bp Feature: gene Location: 1810-3285 bp Feature: domain Description: HsdM Location: 1831-3256 bp Feature: domain Description: HsdM Location: 1831-32 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: JWCM01000133.1 Klebsiella oxytoca strain 112_KOXY 518_30636_767014, whole genome shotgun sequence (30636 bp)
Overview 1 RT 1: 12747-17801 bp Neighborhood of RT #1 [12747, 17801] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 12747-13250 bp Feature: domain Description: ArdA Location: 12765-13236 bp Feature: domain Description: ArdA Location: 12765-13 23 6 bp Feature: gene Location: 13252-13461 bp Feature: gene Location: 13591-15501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13924-14662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 924-14662 bp Feature: domain Description: HNHc Note: nucleases Location: 15217-15382 bp Feature: domain Description: HNHc Note: nucleases Location: 15217-153 82 bp Feature: gene Location: 16381-17565 bp Feature: domain Description: HTH_XRE Location: 16411-16555 bp Feature: domain Description: HTH_XRE Location: 16411-16555 bp Feature: domain Description: Rol_Rep_N Location: 16588-16852 bp Feature: domain Description: Rol_Rep_N Location: 16588-16852 bp Feature: domain Description: Rep_trans Location: 16876-17488 bp Feature: domain Description: Rep_trans Location: 16876-17488 bp Feature: gene Location: 17658-17801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)