myRT

myRT report for GCA_001052915.1_ASM105291v1

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Seq: JWAD01000816.1 Burkholderia cepacia strain 1178_BCEN 2139_15557_195528, whole genome shotgun sequence (15557 bp)
Overview 1 RT 1: 12654-15372 bp Neighborhood of RT #1 [12654, 15380] FACL_FadD13-like AcrR RVT-GII Feature: gene Location: 12654-14219 bp Feature: domain Description: FACL_FadD13-like Location: 12684-14169 bp Feature: domain Description: FACL_FadD1 3-like Location: 1 2684-1 41 69 bp Feature: gene Location: 14443-15138 bp Feature: domain Description: AcrR Location: 14467-14950 bp Feature: domain Description: AcrR Location: 1 4467-1 4950 bp Feature: gene Location: 15228-15380 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15231-15372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5231 -1 5372 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FACL_FadD13-like (cd17631), AcrR (COG1309), RVT-GII

Seq: JWAD01000112.1 Burkholderia cepacia strain 1178_BCEN 242_21113_291068, whole genome shotgun sequence (21113 bp)
Overview 1 RT 1: 1569-6784 bp Neighborhood of RT #1 [1569, 6784] Histone_HNS RVT-Retrons FIN Feature: gene Location: 1569-2924 bp Feature: gene Location: 3009-3338 bp Feature: domain Description: Histone_HNS Location: 3030-3267 bp Feature: domain Description: Histone_HNS Location: 3030-32 67 bp Feature: gene Location: 3710-5170 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4286-4922 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 86-492 2 bp Feature: gene Location: 5313-5885 bp Feature: domain Description: FIN Location: 5490-5847 bp Feature: domain Description: FIN Location: 5490-5847 bp Feature: gene Location: 6512-6784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389)

Seq: JWAD01000280.1 Burkholderia cepacia strain 1178_BCEN 697_6773_97058, whole genome shotgun sequence (6773 bp)
Overview 1 RT 1: 2369-5704 bp Neighborhood of RT #1 [2369, 5704] RVT-DGRs Avd_like Feature: gene Location: 2369-3127 bp Feature: gene Location: 3124-3519 bp Feature: gene Location: 3530-4801 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3896-4658 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 896-4658 bp Feature: gene Location: 4869-5225 bp Feature: domain Description: Avd_like Location: 4896-5202 bp Feature: domain Description: Avd_like Location: 4896-5202 bp Feature: gene Location: 5240-5704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)