myRT

myRT report for GCA_001054095.1_ASM105409v1

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Seq: JVYS01000103.1 Escherichia coli strain 121_ECOL 635_3799_72076_65+,91_, whole genome shotgun sequence (3799 bp)
Overview 1 RT 1: 3-2188 bp Neighborhood of RT #1 [3, 2922] RVT-GII rve Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: gene Location: 960-1178 bp Feature: gene Location: 1423-2922 bp Feature: domain Description: rve Location: 1795-2188 bp Feature: domain Description: rve Location: 1 795-21 88 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, rve (pfam00665)

Seq: JVYS01000104.1 Escherichia coli strain 121_ECOL 636_3984_77041_65_,410+, whole genome shotgun sequence (3984 bp)
Overview 1 RT 1: 2-3392 bp Neighborhood of RT #1 [2, 3430] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 2-409 bp Feature: domain Description: PHA02517 Location: 5-344 bp Feature: domain Description: PHA02 517 Location: 5-344 bp Feature: gene Location: 1001-2524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1274-2006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 74-2 006 bp Feature: domain Description: GIIM Note: maturase Location: 2081-2279 bp Feature: domain Description: GIIM Note: maturase Location: 2 081-2 2 79 bp Feature: gene Location: 2701-2997 bp Feature: domain Description: PHA02517 Location: 2704-2953 bp Feature: domain Description: PHA02 517 Location: 2 704-2 953 bp Feature: gene Location: 3026-3430 bp Feature: domain Description: InsE Location: 3056-3392 bp Feature: domain Description: InsE Location: 3056-3392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: JVYS01000109.1 Escherichia coli strain 121_ECOL 641_27510_446920_128+,282+, whole genome shotgun sequence (27510 bp)
Overview 1 RT 1: 5895-10186 bp Neighborhood of RT #1 [5895, 10186] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 5895-7157 bp Feature: domain Description: YesM Location: 6408-7149 bp Feature: domain Description: YesM Location: 6408-7149 bp Feature: gene Location: 7187-7357 bp Feature: gene Location: 7707-8228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7713-7995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7713 -7995 bp Feature: domain Description: GIIM Note: maturase Location: 8043-8223 bp Feature: domain Description: GIIM Note: maturase Location: 8043 -8223 bp Feature: gene Location: 8256-8795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8586-8664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8586-8664 bp Feature: gene Location: 8826-9023 bp Feature: gene Location: 9281-10186 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: JVYS01000115.1 Escherichia coli strain 121_ECOL 647_55490_1041934_185+,65+, whole genome shotgun sequence (55490 bp)
Overview 1 RT 1: 53204-55424 bp Neighborhood of RT #1 [53204, 55489] PRK10173 PRK10173 RVT-GII PHA02517 Feature: gene Location: 53204-53653 bp Feature: domain Description: PRK10173 Location: 53207-53645 bp Feature: domain Description: PRK10173 Location: 53207-5364 5 bp Feature: gene Location: 53637-53948 bp Feature: domain Description: PRK10173 Location: 53640-53859 bp Feature: domain Description: PRK10173 Location: 5364 0-53859 bp Feature: gene Location: 53987-54490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54260-54332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54 260-54 332 bp Feature: gene Location: 54444-54869 bp Feature: gene Location: 55082-55489 bp Feature: domain Description: PHA02517 Location: 55085-55424 bp Feature: domain Description: PHA02517 Location: 55085-554 24 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)