myRT

myRT report for GCA_001054835.1_ASM105483v1

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Seq: JVND01000139.1 Enterobacter roggenkampii strain 28_ECLO 718_14169_240107_366+,61_,170_, whole genome shotgun sequence (14169 bp)
Overview 1 RT 1: 10715-14166 bp Neighborhood of RT #1 [10715, 14166] RelE DUF5431 RVT_N RVT-GII YkfC HNHc Feature: gene Location: 10715-11002 bp Feature: domain Description: RelE Location: 10718-10976 bp Feature: domain Description: RelE Location: 1 071 8-1 0976 bp Feature: gene Location: 11055-11390 bp Feature: domain Description: DUF5431 Location: 11061-11226 bp Feature: domain Description: DUF5431 Location: 1 1 061 -1 1 226 bp Feature: gene Location: 11810-13483 bp Feature: RT Description: RVT_N Location: 11870-12110 bp Feature: RT Description: RVT_N Location: 1 1 870-1 21 1 0 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12158-12800 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 58-1 2800 bp Feature: domain Description: YkfC Location: 12929-13106 bp Feature: domain Description: YkfC Location: 1 2929-1 31 06 bp Feature: domain Description: HNHc Note: nucleases Location: 13298-13460 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3298-1 3460 bp Feature: gene Location: 13831-14166 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelE (pfam06296), DUF5431 (pfam17496), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)