myRT

myRT report for GCA_001054845.1_ASM105484v1

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Seq: JVMZ01000144.1 Escherichia coli strain 283_ECOL 1478_12407_376512_428+,1029+, whole genome shotgun sequence (12407 bp)
Overview 1 RT 1: 2-2093 bp Neighborhood of RT #1 [2, 2101] PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 2-223 bp Feature: domain Description: PHA02517 Location: 5-158 bp Feature: domain Description: PHA0251 7 Location: 5-1 58 bp Feature: gene Location: 815-1318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1088-1157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 088-1 1 57 bp Feature: gene Location: 1357-1668 bp Feature: domain Description: PRK10173 Location: 1360-1579 bp Feature: domain Description: PRK1 01 73 Location: 1 360-1 579 bp Feature: gene Location: 1652-2101 bp Feature: domain Description: PRK10173 Location: 1655-2093 bp Feature: domain Description: PRK1 01 73 Location: 1 655-2093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: JVMZ01000164.1 Escherichia coli strain 283_ECOL 1503_2146_109555_586_,...,428+, whole genome shotgun sequence (2146 bp)
Overview 1 RT 1: 421-2145 bp Neighborhood of RT #1 [421, 2144] InsE PHA02517 RVT-GII Feature: gene Location: 421-747 bp Feature: domain Description: InsE Location: 424-745 bp Feature: domain Description: InsE Location: 42 4-745 bp Feature: gene Location: 747-1226 bp Feature: domain Description: PHA02517 Location: 807-1161 bp Feature: domain Description: PHA02 517 Location: 807-1161 bp Feature: gene Location: 1818-2144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2091-2145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 091-2 145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: JVMZ01000179.1 Escherichia coli strain 283_ECOL 1520_2281_49906_758+,416_,1136_, whole genome shotgun sequence (2281 bp)
Overview 1 RT 1: 183-2159 bp Neighborhood of RT #1 [183, 2159] RVT-GII GIIM Feature: gene Location: 183-332 bp Feature: gene Location: 405-1655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 609-1266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 609-1266 bp Feature: domain Description: GIIM Note: maturase Location: 1347-1569 bp Feature: domain Description: GIIM Note: maturase Location: 13 47-1569 bp Feature: gene Location: 1649-1966 bp Feature: gene Location: 2019-2159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JVMZ01000198.1 Escherichia coli strain 283_ECOL 1539_3761_151974_866_,1310+,428_, whole genome shotgun sequence (3761 bp)
Overview 1 RT 1: 518-3695 bp Neighborhood of RT #1 [518, 3760] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 518-922 bp Feature: domain Description: InsE Location: 548-884 bp Feature: domain Description: InsE Location: 54 8-884 bp Feature: gene Location: 951-1307 bp Feature: domain Description: PHA02517 Location: 954-1263 bp Feature: domain Description: PHA02517 Location: 954 -1263 bp Feature: gene Location: 1424-2947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1697-2429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1697-24 29 bp Feature: domain Description: GIIM Note: maturase Location: 2504-2702 bp Feature: domain Description: GIIM Note: maturase Location: 2504 -2702 bp Feature: gene Location: 2901-3326 bp Feature: gene Location: 3539-3760 bp Feature: domain Description: PHA02517 Location: 3542-3695 bp Feature: domain Description: PHA02517 Location: 354 2-3695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JVMZ01000269.1 Escherichia coli strain 283_ECOL 1615_7267_130181_1419_,164+, whole genome shotgun sequence (7267 bp)
Overview 1 RT 1: 3-6133 bp Neighborhood of RT #1 [3, 6849] YeeP RVT-UG1 GerD HEPN_Apea Feature: gene Location: 3-716 bp Feature: domain Description: YeeP Location: 6-714 bp Feature: domain Description: YeeP Location: 6-714 bp Feature: gene Location: 1320-5009 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1932-2442 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 1932-2442 bp Feature: gene Location: 5018-5452 bp Feature: domain Description: GerD Location: 5096-5210 bp Feature: domain Description: GerD Location: 5 096-5 210 bp Feature: gene Location: 5749-6849 bp Feature: domain Description: HEPN_Apea Location: 5818-6133 bp Feature: domain Description: HEPN_Apea Location: 5 818-6133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-UG1, GerD (pfam17898), HEPN_Apea (pfam18739)