myRT

myRT report for GCA_001055155.1_ASM105515v1

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Seq: JVGA01000152.1 Escherichia coli strain 464_ECOL 1597_56266_1302097_944_,...,699_, whole genome shotgun sequence (56266 bp)
Overview 1 RT 1: 6773-10193 bp Neighborhood of RT #1 [6773, 10201] DUF4222 RVT-UG4 PRK15211 Feature: gene Location: 6773-6967 bp Feature: domain Description: DUF4222 Location: 6794-6944 bp Feature: domain Description: DUF4222 Location: 6794-6944 bp Feature: gene Location: 7115-7927 bp Feature: gene Location: 7944-8927 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8283-8724 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 8283-8724 bp Feature: gene Location: 8927-9499 bp Feature: gene Location: 9506-10201 bp Feature: domain Description: PRK15211 Location: 9512-10193 bp Feature: domain Description: PRK1 521 1 Location: 951 2-1 01 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4222 (pfam13973), RVT-UG4, PRK15211 (fimbrial chaperone)

Seq: JVGA01000021.1 Escherichia coli strain 464_ECOL 901_85873_1128603, whole genome shotgun sequence (85873 bp)
Overview 1 RT 1: 21060-28760 bp Neighborhood of RT #1 [21060, 28897] proA RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 21060-22313 bp Feature: domain Description: proA Location: 21087-22278 bp Feature: domain Description: proA Location: 2 1087-2 2 2 78 bp Feature: gene Location: 22866-23336 bp Feature: gene Location: 23683-26892 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 24211-24700 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 42 11-2 4700 bp Feature: domain Description: nitrilase Location: 26206-26803 bp Feature: domain Description: nitrilase Location: 2 62 06-2 6803 bp Feature: gene Location: 27187-27990 bp Feature: domain Description: AbiEi_3_N Location: 27220-27481 bp Feature: domain Description: AbiEi_3_N Location: 2 72 2 0-2 7481 bp Feature: domain Description: AbiEi_3 Location: 27493-27949 bp Feature: domain Description: AbiEi_3 Location: 2 7493-2 7949 bp Feature: gene Location: 27977-28897 bp Feature: domain Description: AbiEii Location: 28019-28760 bp Feature: domain Description: AbiEii Location: 2 8019-2 8760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)