myRT

myRT report for GCA_001056255.1_ASM105625v1

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Seq: JVMT01000096.1 Enterobacter roggenkampii strain 29_ECLO 668_14370_542114_199+,406+, whole genome shotgun sequence (14370 bp)
Overview 1 RT 1: 11051-14367 bp Neighborhood of RT #1 [11051, 14367] RelE DUF5431 RVT_N RVT-GII YkfC HNHc Feature: gene Location: 11051-11338 bp Feature: domain Description: RelE Location: 11054-11312 bp Feature: domain Description: RelE Location: 1 1 054-1 1 31 2 bp Feature: gene Location: 11391-11726 bp Feature: domain Description: DUF5431 Location: 11397-11562 bp Feature: domain Description: DUF5431 Location: 1 1 397-1 1 562 bp Feature: gene Location: 12146-13819 bp Feature: RT Description: RVT_N Location: 12206-12446 bp Feature: RT Description: RVT_N Location: 1 2206-1 2446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12494-13136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2494-1 31 36 bp Feature: domain Description: YkfC Location: 13265-13442 bp Feature: domain Description: YkfC Location: 1 3265-1 3442 bp Feature: domain Description: HNHc Note: nucleases Location: 13634-13796 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3634-1 3796 bp Feature: gene Location: 14167-14367 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelE (pfam06296), DUF5431 (pfam17496), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)