myRT

myRT report for GCA_001056375.1_ASM105637v1

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Seq: JVLJ01000223.1 Burkholderia cenocepacia strain 33_BMUL 1870_14643_205904_480+,1313+, whole genome shotgun sequence (14643 bp)
Overview 1 RT 1: 8-4684 bp Neighborhood of RT #1 [8, 4698] COG3547 RVT-GII GIIM GDP_MD_SDR_e Gmd Feature: gene Location: 8-1042 bp Feature: domain Description: COG3547 Location: 23-986 bp Feature: domain Description: COG3547 Location: 23-986 bp Feature: gene Location: 1291-2580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1546-2161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 546-21 61 bp Feature: domain Description: GIIM Note: maturase Location: 2221-2422 bp Feature: domain Description: GIIM Note: maturase Location: 2221 -2422 bp Feature: gene Location: 2700-3590 bp Feature: domain Description: GDP_MD_SDR_e Location: 2703-3558 bp Feature: domain Description: GDP_MD_SDR_e Location: 2703-3558 bp Feature: gene Location: 3652-4698 bp Feature: domain Description: Gmd Location: 3667-4684 bp Feature: domain Description: Gmd Location: 3667-4684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GDP_MD_SDR_e (cd05260), Gmd (COG1089), COG3547 (Transposase )

Seq: JVLJ01000245.1 Burkholderia cenocepacia strain 33_BMUL 1892_7941_218931_639_,...,480_, whole genome shotgun sequence (7941 bp)
Overview 1 RT 1: 3323-7878 bp Neighborhood of RT #1 [3323, 7934] PRK09121 RutF RVT-GII GIIM COG3547 Feature: gene Location: 3323-4351 bp Feature: domain Description: PRK09121 Location: 3335-4346 bp Feature: domain Description: PRK0912 1 Location: 3335-4346 bp Feature: gene Location: 4453-5001 bp Feature: domain Description: RutF Location: 4519-4981 bp Feature: domain Description: RutF Location: 4519-4981 bp Feature: gene Location: 5338-6735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5671-6289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5671-62 89 bp Feature: domain Description: GIIM Note: maturase Location: 6340-6550 bp Feature: domain Description: GIIM Note: maturase Location: 6340-6550 bp Feature: gene Location: 6900-7934 bp Feature: domain Description: COG3547 Location: 6915-7878 bp Feature: domain Description: COG3547 Location: 6915-7878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09121 (methionine synthase), RutF (TIGR03615), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: JVLJ01000246.1 Burkholderia cenocepacia strain 33_BMUL 1893_127962_1847129_639_,...,1329_, whole genome shotgun sequence (127962 bp)
Overview 1 RT 1: 118511-124016 bp Neighborhood of RT #1 [118511, 124039] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 118511-119428 bp Feature: domain Description: his_ut_repres Location: 118751-119423 bp Feature: domain Description: his_ut_repres Location: 118751-119423 bp Feature: gene Location: 119747-120235 bp Feature: domain Description: FIN Location: 119843-120200 bp Feature: domain Description: FIN Location: 119843 -120200 bp Feature: gene Location: 120489-121838 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 120954-121590 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 120954-121590 bp Feature: gene Location: 122143-122493 bp Feature: domain Description: Histone_HNS Location: 122185-122422 bp Feature: domain Description: Histone_HNS Location: 122185-122422 bp Feature: gene Location: 122804-124039 bp Feature: domain Description: MFS_MucK Location: 122882-124016 bp Feature: domain Description: MFS_MucK Location: 122882-124016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)