myRT

myRT report for GCA_001056435.1_ASM105643v1

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Seq: JVKX01001472.1 Burkholderia cenocepacia strain 34_BCEN 4904_11518_121254_961+,...,1009+, whole genome shotgun sequence (11518 bp)
Overview 1 RT 1: 3-4670 bp Neighborhood of RT #1 [3, 4684] COG3547 RVT-GII GIIM GDP_MD_SDR_e Gmd Feature: gene Location: 3-1028 bp Feature: domain Description: COG3547 Location: 18-981 bp Feature: domain Description: COG3547 Location: 1 8-981 bp Feature: gene Location: 1277-2566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1532-2147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 532-21 47 bp Feature: domain Description: GIIM Note: maturase Location: 2207-2408 bp Feature: domain Description: GIIM Note: maturase Location: 2207-2408 bp Feature: gene Location: 2686-3576 bp Feature: domain Description: GDP_MD_SDR_e Location: 2689-3544 bp Feature: domain Description: GDP_MD_SDR_e Location: 2689-3544 bp Feature: gene Location: 3638-4684 bp Feature: domain Description: Gmd Location: 3653-4670 bp Feature: domain Description: Gmd Location: 3653-4670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), GDP_MD_SDR_e (cd05260), COG3547 (Transposase )

Seq: JVKX01001473.1 Burkholderia cenocepacia strain 34_BCEN 4905_2652_57265_961+,...,2470+, whole genome shotgun sequence (2652 bp)
Overview 1 RT 1: 3-2405 bp Neighborhood of RT #1 [3, 2590] COG3547 RVT-GII GIIM Feature: gene Location: 3-1028 bp Feature: domain Description: COG3547 Location: 18-981 bp Feature: domain Description: COG3547 Location: 18-981 bp Feature: gene Location: 1193-2590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1526-2144 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 6-2 144 bp Feature: domain Description: GIIM Note: maturase Location: 2195-2405 bp Feature: domain Description: GIIM Note: maturase Location: 2 195-2 405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: JVKX01001591.1 Burkholderia cenocepacia strain 34_BCEN 5023_31594_294076_1983_,2579_,1518+, whole genome shotgun sequence (31594 bp)
Overview 1 RT 1: 25213-30718 bp Neighborhood of RT #1 [25213, 30741] his_ut_repres FIN RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 25213-26130 bp Feature: domain Description: his_ut_repres Location: 25453-26125 bp Feature: domain Description: his_ut_repres Location: 25453 -26125 bp Feature: gene Location: 26449-26937 bp Feature: domain Description: FIN Location: 26545-26902 bp Feature: domain Description: FIN Location: 26545-26902 bp Feature: gene Location: 27191-28540 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27656-28292 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27656-28292 bp Feature: gene Location: 28845-29195 bp Feature: domain Description: Histone_HNS Location: 28887-29124 bp Feature: domain Description: Histone_HNS Location: 28887-29124 bp Feature: gene Location: 29506-30741 bp Feature: domain Description: MFS_MucK Location: 29584-30718 bp Feature: domain Description: MFS_MucK Location: 29584-3 0718 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT his_ut_repres (TIGR02018), FIN (cd16389), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)