myRT

myRT report for GCA_001056675.1_ASM105667v1

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Seq: JVHT01000009.1 Acinetobacter ursingii strain 421_ABAU 388_307252_6126794_62+,...,175+, whole genome shotgun sequence (307252 bp)
Overview 1 RT 1: 202769-207519 bp Neighborhood of RT #1 [202769, 207845] PRK09692 RVT-UG2 DUF4031 TS_Pyrimidine_HMase Feature: gene Location: 202769-202954 bp Feature: gene Location: 203104-204276 bp Feature: domain Description: PRK09692 Location: 203110-204262 bp Feature: domain Description: PRK09692 Location: 2031 1 0-204262 bp Feature: gene Location: 204464-205867 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 204701-205598 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 204701 -205598 bp Feature: gene Location: 206526-206834 bp Feature: domain Description: DUF4031 Location: 206535-206757 bp Feature: domain Description: DUF4031 Location: 206535-206757 bp Feature: gene Location: 206841-207845 bp Feature: domain Description: TS_Pyrimidine_HMase Location: 206880-207519 bp Feature: domain Description: TS_Pyrimidine_HMase Location: 206880-20751 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG2, DUF4031 (pfam13223), TS_Pyrimidine_HMase (cl19097)

Seq: JVHT01000016.1 Acinetobacter ursingii strain 421_ABAU 395_50993_1160358_135_,360+,211_, whole genome shotgun sequence (50993 bp)
Overview 1 RT 1: 5382-11011 bp Neighborhood of RT #1 [5382, 11031] KAP_NTPase RVT_N RVT-GII GIIM COG5377 Feature: gene Location: 5382-7175 bp Feature: domain Description: KAP_NTPase Location: 5424-6537 bp Feature: domain Description: KAP_NTPase Location: 542 4-6537 bp Feature: gene Location: 7478-8206 bp Feature: gene Location: 8397-9977 bp Feature: domain Description: RVT_N Location: 8454-8697 bp Feature: domain Description: RVT_N Location: 8454-8697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8742-9393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8742 -9393 bp Feature: domain Description: GIIM Note: maturase Location: 9444-9678 bp Feature: domain Description: GIIM Note: maturase Location: 9444-9678 bp Feature: gene Location: 10300-10521 bp Feature: gene Location: 10570-11031 bp Feature: domain Description: COG5377 Location: 10654-11011 bp Feature: domain Description: COG5377 Location: 10654-11011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KAP_NTPase (pfam07693), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG5377 (Phage-related protein, predicted endonuclease )

Seq: JVHT01000026.1 Acinetobacter ursingii strain 421_ABAU 406_107672_2209862_236_,...,135_, whole genome shotgun sequence (107672 bp)
Overview 1 RT 1: 94474-100360 bp Neighborhood of RT #1 [94474, 100360] prfC COG3177 RVT-UG2 T5orf172 Feature: gene Location: 94474-96063 bp Feature: domain Description: prfC Location: 94489-96061 bp Feature: domain Description: prfC Location: 94489-96061 bp Feature: gene Location: 96246-97250 bp Feature: domain Description: COG3177 Location: 96252-97143 bp Feature: domain Description: COG3 177 Location: 96252-97143 bp Feature: gene Location: 97366-98766 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 97603-98497 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 97603 -98497 bp Feature: gene Location: 99154-100068 bp Feature: domain Description: T5orf172 Location: 99679-100003 bp Feature: domain Description: T5orf172 Location: 99679-100003 bp Feature: gene Location: 100073-100360 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), COG3177 (Fic family protein ), RVT-UG2, T5orf172 (smart00974)