myRT

myRT report for GCA_001056845.1_ASM105684v1

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Seq: JVGL01000012.1 Escherichia coli strain 455_ECOL 516_28328_1493892_69+,127+,484_, whole genome shotgun sequence (28328 bp)
Overview 1 RT 1: 24899-28262 bp Neighborhood of RT #1 [24899, 28327] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 24899-25303 bp Feature: domain Description: InsE Location: 24929-25265 bp Feature: domain Description: InsE Location: 24929-25265 bp Feature: gene Location: 25332-25688 bp Feature: domain Description: PHA02517 Location: 25335-25644 bp Feature: domain Description: PHA0251 7 Location: 25335-25644 bp Feature: gene Location: 25805-27328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26078-26810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26078-2681 0 bp Feature: domain Description: GIIM Note: maturase Location: 26885-27083 bp Feature: domain Description: GIIM Note: maturase Location: 26885-27083 bp Feature: gene Location: 27282-27707 bp Feature: gene Location: 27920-28327 bp Feature: domain Description: PHA02517 Location: 27923-28262 bp Feature: domain Description: PHA0251 7 Location: 27923-28262 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JVGL01000029.1 Escherichia coli strain 455_ECOL 536_4163_316424_262_,472+,484+, whole genome shotgun sequence (4163 bp)
Overview 1 RT 1: 1242-4162 bp Neighborhood of RT #1 [1242, 4161] rve PHA02517 RVT-GII Feature: gene Location: 1242-2741 bp Feature: domain Description: rve Location: 1614-2007 bp Feature: domain Description: rve Location: 1614-2 007 bp Feature: gene Location: 3031-3243 bp Feature: domain Description: PHA02517 Location: 3034-3178 bp Feature: domain Description: PHA02 517 Location: 3034-3178 bp Feature: gene Location: 3835-4161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4108-4162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4108-4162 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII

Seq: JVGL01000038.1 Escherichia coli strain 455_ECOL 545_55394_2850991_414+,184+,484_, whole genome shotgun sequence (55394 bp)
Overview 1 RT 1: 53108-55328 bp Neighborhood of RT #1 [53108, 55393] PRK10173 PRK10173 RVT-GII PHA02517 Feature: gene Location: 53108-53557 bp Feature: domain Description: PRK10173 Location: 53111-53549 bp Feature: domain Description: PRK10173 Location: 53 111-53 549 bp Feature: gene Location: 53541-53852 bp Feature: domain Description: PRK10173 Location: 53544-53763 bp Feature: domain Description: PRK10173 Location: 53 544-53 763 bp Feature: gene Location: 53891-54394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54164-54236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54164-5423 6 bp Feature: gene Location: 54348-54773 bp Feature: gene Location: 54986-55393 bp Feature: domain Description: PHA02517 Location: 54989-55328 bp Feature: domain Description: PHA02517 Location: 54989-553 28 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)