myRT

myRT report for GCA_001056965.1_ASM105696v1

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Seq: JVFF01000025.1 Escherichia coli strain 486_ECOL 159_70368_1112399, whole genome shotgun sequence (70368 bp)
Overview 1 RT 1: 57752-61693 bp Neighborhood of RT #1 [57752, 61693] RVT-Retrons Feature: gene Location: 57752-58891 bp Feature: gene Location: 58937-59104 bp Feature: gene Location: 59126-60898 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59285-59903 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 59285-59903 bp Feature: gene Location: 61119-61262 bp Feature: gene Location: 61454-61693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JVFF01000107.1 Escherichia coli strain 486_ECOL 676_2105_337579_68+,401+,27+, whole genome shotgun sequence (2105 bp)
Overview 1 RT 1: 3-2086 bp Neighborhood of RT #1 [3, 2103] RVT-GII PHA02517 Rve Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 76-330 bp Feature: gene Location: 921-1379 bp Feature: domain Description: PHA02517 Location: 960-1314 bp Feature: domain Description: PHA02 517 Location: 960-1314 bp Feature: gene Location: 1426-2103 bp Feature: domain Description: Rve Location: 1441-2086 bp Feature: domain Description: Rve Location: 1441-2 086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: JVFF01000108.1 Escherichia coli strain 486_ECOL 677_12395_1473644_68_,...,149+, whole genome shotgun sequence (12395 bp)
Overview 1 RT 1: 1-1935 bp Neighborhood of RT #1 [1, 1943] RVT-GII PRK10173 PRK10173 Feature: gene Location: 1-363 bp Feature: gene Location: 657-1160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1002 bp Feature: gene Location: 1199-1510 bp Feature: domain Description: PRK10173 Location: 1202-1421 bp Feature: domain Description: PRK10173 Location: 1202-1421 bp Feature: gene Location: 1494-1943 bp Feature: domain Description: PRK10173 Location: 1497-1935 bp Feature: domain Description: PRK10173 Location: 1497-193 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII

Seq: JVFF01000109.1 Escherichia coli strain 486_ECOL 678_3640_252238_68_,620_,459+, whole genome shotgun sequence (3640 bp)
Overview 1 RT 1: 1-3048 bp Neighborhood of RT #1 [1, 3086] RVT-GII GIIM PHA02517 InsE Feature: gene Location: 1-363 bp Feature: gene Location: 657-2180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: domain Description: GIIM Note: maturase Location: 1737-1935 bp Feature: gene Location: 2357-2653 bp Feature: domain Description: PHA02517 Location: 2360-2609 bp Feature: domain Description: PHA02517 Location: 2360-2609 bp Feature: gene Location: 2682-3086 bp Feature: domain Description: InsE Location: 2712-3048 bp Feature: domain Description: InsE Location: 2712-304 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, GIIM (pfam08388)

Seq: JVFF01000148.1 Escherichia coli strain 486_ECOL 717_3992_218774_550+,68_, whole genome shotgun sequence (3992 bp)
Overview 1 RT 1: 2318-3991 bp Neighborhood of RT #1 [2318, 3990] InsE PHA02517 RVT-GII Feature: gene Location: 2318-2620 bp Feature: domain Description: InsE Location: 2327-2609 bp Feature: domain Description: InsE Location: 2327-2609 bp Feature: gene Location: 2647-3072 bp Feature: domain Description: PHA02517 Location: 2671-3007 bp Feature: domain Description: PHA025 17 Location: 2671-3007 bp Feature: gene Location: 3664-3990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3937-3991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3937-3991 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII