myRT

myRT report for GCA_001058055.1_ASM105805v1

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Seq: JUWJ01000260.1 Enterococcus faecium strain 704_EFCM 1230_27121_559449, whole genome shotgun sequence (27121 bp)
Overview 1 RT 1: 12743-17484 bp Neighborhood of RT #1 [12743, 17561] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 12743-13246 bp Feature: domain Description: ArdA Location: 12761-13232 bp Feature: domain Description: ArdA Location: 1 2761 -1 3232 bp Feature: gene Location: 13248-13457 bp Feature: gene Location: 13587-15497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13920-14658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3920-1 4658 bp Feature: domain Description: HNHc Note: nucleases Location: 15213-15378 bp Feature: domain Description: HNHc Note: nucleases Location: 1 521 3-1 5378 bp Feature: gene Location: 16006-16155 bp Feature: gene Location: 16377-17561 bp Feature: domain Description: HTH_XRE Location: 16407-16551 bp Feature: domain Description: HTH_XRE Location: 1 6407-1 6551 bp Feature: domain Description: Rol_Rep_N Location: 16584-16848 bp Feature: domain Description: Rol_Rep_N Location: 1 6584-1 6848 bp Feature: domain Description: Rep_trans Location: 16872-17484 bp Feature: domain Description: Rep_trans Location: 1 6872-1 7484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdA (pfam07275), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486)

Seq: JUWJ01000403.1 Enterococcus faecium strain 704_EFCM 1796_3279_109334, whole genome shotgun sequence (3279 bp)
Overview 1 RT 1: 2-3252 bp Neighborhood of RT #1 [2, 3278] RVT-AbiP2 HsdM Feature: gene Location: 2-1468 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 341-806 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 341-806 bp Feature: gene Location: 1806-3278 bp Feature: domain Description: HsdM Location: 1827-3252 bp Feature: domain Description: HsdM Location: 182 7-32 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: JUWJ01000418.1 Enterococcus faecium strain 704_EFCM 1864_9964_798469, whole genome shotgun sequence (9964 bp)
Overview 1 RT 1: 5222-9962 bp Neighborhood of RT #1 [5222, 9962] VirB4 RVT-GII HNHc Feature: gene Location: 5222-6916 bp Feature: domain Description: VirB4 Location: 5540-6224 bp Feature: domain Description: VirB4 Location: 5540-6224 bp Feature: gene Location: 7184-7417 bp Feature: gene Location: 7604-9481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7919-8657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7919-8657 bp Feature: domain Description: HNHc Note: nucleases Location: 9215-9368 bp Feature: domain Description: HNHc Note: nucleases Location: 9215-93 68 bp Feature: gene Location: 9669-9962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507)