myRT

myRT report for GCA_001058095.1_ASM105809v1

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Seq: JUWB01000318.1 Enterococcus faecium strain 712_EFCM 1066_3326_141770, whole genome shotgun sequence (3326 bp)
Overview 1 RT 1: 19-2648 bp Neighborhood of RT #1 [19, 3310] HsdM RVT-AbiP2 Feature: gene Location: 19-1497 bp Feature: domain Description: HsdM Location: 40-1465 bp Feature: domain Description: HsdM Location: 40-1 465 bp Feature: gene Location: 1835-3310 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2183-2648 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 21 83-2648 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: JUWB01000365.1 Enterococcus faecium strain 712_EFCM 1227_2761_232825, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 131-1922 bp Neighborhood of RT #1 [131, 2041] RVT-GII HNHc Feature: gene Location: 131-2041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-12 02 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-192 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: JUWB01000045.1 Enterococcus faecium strain 712_EFCM 146_13833_242496, whole genome shotgun sequence (13833 bp)
Overview 1 RT 1: 6281-13468 bp Neighborhood of RT #1 [6281, 13468] AAA_10 RVT-GII HNHc Feature: gene Location: 6281-8404 bp Feature: gene Location: 8409-9689 bp Feature: domain Description: AAA_10 Location: 8571-9654 bp Feature: domain Description: AAA_10 Location: 8571-9654 bp Feature: gene Location: 9729-11531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10026-10725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10026-10725 bp Feature: domain Description: HNHc Note: nucleases Location: 11280-11418 bp Feature: domain Description: HNHc Note: nucleases Location: 11280-11418 bp Feature: gene Location: 12057-12206 bp Feature: gene Location: 12209-13468 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, HNHc (smart00507)

Seq: JUWB01000291.1 Enterococcus faecium strain 712_EFCM 984_2682_250468, whole genome shotgun sequence (2682 bp)
Overview 1 RT 1: 112-1069 bp Neighborhood of RT #1 [112, 1896] RVT-GII Feature: gene Location: 112-1896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-1069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 370-1069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JUWB01000004.1 Enterococcus faecium strain 712_EFCM 9_5182_91541, whole genome shotgun sequence (5182 bp)
Overview 1 RT 1: 978-5060 bp Neighborhood of RT #1 [978, 5179] Zeta_toxin FtsK RVT-GII HNHc FtsK_SpoIIIE Feature: gene Location: 978-1217 bp Feature: domain Description: Zeta_toxin Location: 1077-1206 bp Feature: domain Description: Zeta_toxin Location: 1077-1206 bp Feature: gene Location: 1312-1656 bp Feature: domain Description: FtsK Location: 1324-1564 bp Feature: domain Description: FtsK Location: 1324-15 64 bp Feature: gene Location: 1758-3632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2124-2820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2124-2820 bp Feature: domain Description: HNHc Note: nucleases Location: 3360-3519 bp Feature: domain Description: HNHc Note: nucleases Location: 3360-35 19 bp Feature: gene Location: 4226-5179 bp Feature: domain Description: FtsK_SpoIIIE Location: 4814-5060 bp Feature: domain Description: FtsK_SpoIIIE Location: 4814-5 060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zeta_toxin (pfam06414), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580)