myRT

myRT report for GCA_001059175.1_ASM105917v1

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Seq: JURK01000009.1 Bacillus cereus strain 823_BTHU 413_282798_7750603, whole genome shotgun sequence (282798 bp)
Overview 1 RT 1: 10278-14353 bp Neighborhood of RT #1 [10278, 14367] YugN amiF RVT-GII HNHc amiF Feature: gene Location: 10278-10643 bp Feature: domain Description: YugN Location: 10296-10557 bp Feature: domain Description: YugN Location: 1 0296-1 0557 bp Feature: gene Location: 10690-11313 bp Feature: domain Description: amiF Location: 10693-11308 bp Feature: domain Description: amiF Location: 1 0693-1 1 308 bp Feature: gene Location: 11430-13262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11730-12435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 730-1 2435 bp Feature: domain Description: HNHc Note: nucleases Location: 13014-13146 bp Feature: domain Description: HNHc Note: nucleases Location: 1 301 4-1 31 46 bp Feature: gene Location: 13655-13831 bp Feature: gene Location: 13978-14367 bp Feature: domain Description: amiF Location: 13981-14353 bp Feature: domain Description: amiF Location: 1 3981 -1 4353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YugN (pfam08868), amiF (PRK13287), RVT-GII, HNHc (smart00507)

Seq: JURK01000031.1 Bacillus cereus strain 823_BTHU 604_62084_1338193_194+,...,393+, whole genome shotgun sequence (62003 bp)
Overview 1 RT 1: 58260-61541 bp Neighborhood of RT #1 [58260, 61894] PRK06752 AAA_18 RVT_N RVT-GII GIIM Feature: gene Location: 58260-58595 bp Feature: domain Description: PRK06752 Location: 58263-58593 bp Feature: domain Description: PRK06752 Location: 582 63-58593 bp Feature: gene Location: 58933-59493 bp Feature: domain Description: AAA_18 Location: 58948-59341 bp Feature: domain Description: AAA_18 Location: 58948-59341 bp Feature: gene Location: 60248-61894 bp Feature: RT Description: RVT_N Location: 60290-60527 bp Feature: RT Description: RVT_N Location: 602 90-6052 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60581-61241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60581-612 41 bp Feature: domain Description: GIIM Note: maturase Location: 61310-61541 bp Feature: domain Description: GIIM Note: maturase Location: 61310-61541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06752 (single-stranded DNA-binding protein; Validated), AAA_18 (pfam13238), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JURK01000042.1 Bacillus cereus strain 823_BTHU 616_224088_4417600_349_,...,393_, whole genome shotgun sequence (224062 bp)
Overview 1 RT 1: 214031-223095 bp Neighborhood of RT #1 [214031, 223448] PRK12451 RVT-GII Intron_maturas2 HNHc SAM_MT YphP_YqiW DUF393 Nfu_N Virulence_fact HEAT RVT_N RVT-GII GIIM Feature: gene Location: 214031-215719 bp Feature: domain Description: PRK12451 Location: 214034-215717 bp Feature: domain Description: PRK12451 Location: 21403 4-215717 bp Feature: gene Location: 216020-216187 bp Feature: gene Location: 216345-218162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216609-217440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 216609-217440 bp Feature: domain Description: Intron_maturas2 Location: 217521-217812 bp Feature: domain Description: Intron_maturas2 Location: 217521-217812 bp Feature: domain Description: HNHc Note: nucleases Location: 217959-218136 bp Feature: domain Description: HNHc Note: nucleases Location: 217959-21813 6 bp Feature: gene Location: 218778-219344 bp Feature: domain Description: SAM_MT Location: 218901-219333 bp Feature: domain Description: SAM_MT Location: 218901-2193 3 3 bp Feature: gene Location: 219394-219828 bp Feature: domain Description: YphP_YqiW Location: 219418-219826 bp Feature: domain Description: YphP_YqiW Location: 219418-219826 bp Feature: gene Location: 219912-220295 bp Feature: domain Description: DUF393 Location: 219921-220239 bp Feature: domain Description: DUF3 93 Location: 219921-22023 9 bp Feature: gene Location: 220299-221426 bp Feature: domain Description: Nfu_N Location: 220317-220560 bp Feature: domain Description: Nfu_N Location: 2203 17-220560 bp Feature: domain Description: Virulence_fact Location: 220620-220854 bp Feature: domain Description: Virulence_fact Location: 220620-220854 bp Feature: domain Description: HEAT Location: 220962-221415 bp Feature: domain Description: HEAT Location: 220962-221415 bp Feature: gene Location: 221802-223448 bp Feature: RT Description: RVT_N Location: 221844-222081 bp Feature: RT Description: RVT_N Location: 221844-222081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 222135-222795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22213 5-222795 bp Feature: domain Description: GIIM Note: maturase Location: 222864-223095 bp Feature: domain Description: GIIM Note: maturase Location: 222864-223 095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12451 (arginyl-tRNA synthetase; Reviewed), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SAM_MT (pfam04445), YphP_YqiW (TIGR04191), DUF393 (pfam04134), Nfu_N (smart00932), Virulence_fact (pfam13769), HEAT (sd00044)
RVT_N (pfam13655), GIIM (pfam08388)

Seq: JURK01000044.1 Bacillus cereus strain 823_BTHU 618_61666_1247305_393+,20+, whole genome shotgun sequence (61666 bp)
Overview 1 RT 1: 615-3271 bp Neighborhood of RT #1 [615, 3271] RVT_N RVT-GII GIIM Feature: gene Location: 615-2261 bp Feature: RT Description: RVT_N Location: 657-894 bp Feature: RT Description: RVT_N Location: 657-894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948-1608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94 8-1608 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1908 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1908 bp Feature: gene Location: 2630-2971 bp Feature: gene Location: 3080-3271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JURK01000045.1 Bacillus cereus strain 823_BTHU 619_81986_2260686_393+,...,70+, whole genome shotgun sequence (81986 bp)
Overview 1 RT 1: 615-4100 bp Neighborhood of RT #1 [615, 5986] RVT_N RVT-GII GIIM SLH SLH SLH COG5263 Feature: gene Location: 615-2261 bp Feature: RT Description: RVT_N Location: 657-894 bp Feature: RT Description: RVT_N Location: 65 7-894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948-1608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948-1608 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1908 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1908 bp Feature: gene Location: 2378-2602 bp Feature: gene Location: 3158-5986 bp Feature: domain Description: SLH Location: 3269-3395 bp Feature: domain Description: SLH Location: 3269-3395 bp Feature: domain Description: SLH Location: 3443-3569 bp Feature: domain Description: SLH Location: 3443-35 69 bp Feature: domain Description: SLH Location: 3620-3740 bp Feature: domain Description: SLH Location: 3620-3740 bp Feature: domain Description: COG5263 Location: 3800-4100 bp Feature: domain Description: COG5 263 Location: 3800-4100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLH (pfam00395), COG5263 (Glucan-binding domain (YG repeat) ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JURK01000046.1 Bacillus cereus strain 823_BTHU 620_44106_917366_393_,...,545+, whole genome shotgun sequence (44106 bp)
Overview 1 RT 1: 110-3930 bp Neighborhood of RT #1 [110, 3953] RVT_N RVT-GII GIIM MhpC Feature: gene Location: 110-1756 bp Feature: RT Description: RVT_N Location: 152-389 bp Feature: RT Description: RVT_N Location: 152-389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-1103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 443-1103 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1403 bp Feature: domain Description: GIIM Note: maturase Location: 1172-1403 bp Feature: gene Location: 2725-2925 bp Feature: gene Location: 3099-3953 bp Feature: domain Description: MhpC Location: 3132-3930 bp Feature: domain Description: MhpC Location: 3132-3930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), MhpC (COG0596)

Seq: JURK01000054.1 Bacillus cereus strain 823_BTHU 630_238599_6442954_566+,...,393+, whole genome shotgun sequence (238599 bp)
Overview 1 RT 1: 235071-238137 bp Neighborhood of RT #1 [235071, 238490] RimL RVT_N RVT-GII GIIM Feature: gene Location: 235071-235205 bp Feature: gene Location: 235660-236205 bp Feature: domain Description: RimL Location: 235678-236191 bp Feature: domain Description: RimL Location: 23567 8-236191 bp Feature: gene Location: 236844-238490 bp Feature: RT Description: RVT_N Location: 236886-237123 bp Feature: RT Description: RVT_N Location: 236886-237 123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 237177-237837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 237 17 7 -237 837 bp Feature: domain Description: GIIM Note: maturase Location: 237906-238137 bp Feature: domain Description: GIIM Note: maturase Location: 237 906-238137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimL (COG1670), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)