myRT

myRT report for GCA_001059305.1_ASM105930v1

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Seq: JUPN01000437.1 Burkholderia cenocepacia strain 881_BCEN 1125_7840_128150, whole genome shotgun sequence (7840 bp)
Overview 1 RT 1: 199-3592 bp Neighborhood of RT #1 [199, 3606] RVT-GII GIIM GDP_MD_SDR_e Gmd Feature: gene Location: 199-1488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454-1069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 454-1 069 bp Feature: domain Description: GIIM Note: maturase Location: 1129-1330 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 29-1 330 bp Feature: gene Location: 1608-2498 bp Feature: domain Description: GDP_MD_SDR_e Location: 1611-2466 bp Feature: domain Description: GDP_MD_SDR_e Location: 1 61 1 -2466 bp Feature: gene Location: 2560-3606 bp Feature: domain Description: Gmd Location: 2575-3592 bp Feature: domain Description: Gmd Location: 2575-3592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_MD_SDR_e (cd05260), RVT-GII, GIIM (pfam08388), Gmd (COG1089)

Seq: JUPN01000501.1 Burkholderia cenocepacia strain 881_BCEN 1295_1574_57361, whole genome shotgun sequence (1574 bp)
Overview 1 RT 1: 63-1275 bp Neighborhood of RT #1 [63, 1460] RVT-GII GIIM Feature: gene Location: 63-1460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 396-1014 bp Feature: domain Description: GIIM Note: maturase Location: 1065-1275 bp Feature: domain Description: GIIM Note: maturase Location: 1065-12 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JUPN01000201.1 Burkholderia cenocepacia strain 881_BCEN 546_24356_379870, whole genome shotgun sequence (24356 bp)
Overview 1 RT 1: 1554-7077 bp Neighborhood of RT #1 [1554, 7082] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 1554-2789 bp Feature: domain Description: MFS_MucK Location: 1632-2766 bp Feature: domain Description: MFS_MucK Location: 163 2-2766 bp Feature: gene Location: 3100-3429 bp Feature: domain Description: Histone_HNS Location: 3121-3358 bp Feature: domain Description: Histone_HNS Location: 3 121-3 3 58 bp Feature: gene Location: 3755-5215 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4331-4967 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43 3 1-4967 bp Feature: gene Location: 5358-5930 bp Feature: domain Description: FIN Location: 5538-5895 bp Feature: domain Description: FIN Location: 553 8-5895 bp Feature: gene Location: 6165-7082 bp Feature: domain Description: his_ut_repres Location: 6405-7077 bp Feature: domain Description: his_ut_repres Location: 6405-7077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)