myRT

myRT report for GCA_001059335.1_ASM105933v1

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Seq: JUPC01000123.1 Burkholderia cenocepacia strain 891_BCEN 284_122572_2702657, whole genome shotgun sequence (122572 bp)
Overview 1 RT 1: 1681-7204 bp Neighborhood of RT #1 [1681, 7209] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 1681-2916 bp Feature: domain Description: MFS_MucK Location: 1759-2893 bp Feature: domain Description: MFS_MucK Location: 1 759-2893 bp Feature: gene Location: 3227-3556 bp Feature: domain Description: Histone_HNS Location: 3248-3485 bp Feature: domain Description: Histone_HNS Location: 3248-3485 bp Feature: gene Location: 3882-5342 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4458-5094 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4458-5094 bp Feature: gene Location: 5485-5973 bp Feature: domain Description: FIN Location: 5581-5938 bp Feature: domain Description: FIN Location: 5581 -5938 bp Feature: gene Location: 6292-7209 bp Feature: domain Description: his_ut_repres Location: 6532-7204 bp Feature: domain Description: his_ut_repres Location: 6532-7204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: JUPC01000295.1 Burkholderia cenocepacia strain 891_BCEN 775_1584_75244, whole genome shotgun sequence (1584 bp)
Overview 1 RT 1: 125-1337 bp Neighborhood of RT #1 [125, 1522] RVT-GII GIIM Feature: gene Location: 125-1522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-1076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-1076 bp Feature: domain Description: GIIM Note: maturase Location: 1127-1337 bp Feature: domain Description: GIIM Note: maturase Location: 112 7-1337 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JUPC01000296.1 Burkholderia cenocepacia strain 891_BCEN 776_13571_297241, whole genome shotgun sequence (13571 bp)
Overview 1 RT 1: 209-3602 bp Neighborhood of RT #1 [209, 3616] RVT-GII GIIM GDP_MD_SDR_e Gmd Feature: gene Location: 209-1498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1079 bp Feature: domain Description: GIIM Note: maturase Location: 1139-1340 bp Feature: domain Description: GIIM Note: maturase Location: 113 9-13 40 bp Feature: gene Location: 1618-2508 bp Feature: domain Description: GDP_MD_SDR_e Location: 1621-2476 bp Feature: domain Description: GDP_MD_SDR_e Location: 1621-2476 bp Feature: gene Location: 2570-3616 bp Feature: domain Description: Gmd Location: 2585-3602 bp Feature: domain Description: Gmd Location: 2585-3 602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDP_MD_SDR_e (cd05260), RVT-GII, GIIM (pfam08388), Gmd (COG1089)