myRT

myRT report for GCA_001059685.1_ASM105968v1

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Seq: JULU01000123.1 Enterococcus faecium strain 964_EFCM 469_4619_90286, whole genome shotgun sequence (4619 bp)
Overview 1 RT 1: 1-4617 bp Neighborhood of RT #1 [1, 4616] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 1-258 bp Feature: domain Description: RelB_DinJ Location: 124-250 bp Feature: domain Description: RelB_DinJ Location: 1 24-250 bp Feature: gene Location: 327-1343 bp Feature: domain Description: FtsK_SpoIIIE Location: 984-1224 bp Feature: domain Description: FtsK_SpoIIIE Location: 984-1 224 bp Feature: gene Location: 1937-3811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2303-2999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2303-2999 bp Feature: domain Description: HNHc Note: nucleases Location: 3539-3698 bp Feature: domain Description: HNHc Note: nucleases Location: 3539-3698 bp Feature: gene Location: 3913-4293 bp Feature: domain Description: FtsK Location: 3928-4168 bp Feature: domain Description: FtsK Location: 3928-41 68 bp Feature: gene Location: 4338-4616 bp Feature: domain Description: Dcm Location: 4341-4617 bp Feature: domain Description: Dcm Location: 4341 -461 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: JULU01000130.1 Enterococcus faecium strain 964_EFCM 512_8825_159582, whole genome shotgun sequence (8825 bp)
Overview 1 RT 1: 3377-8764 bp Neighborhood of RT #1 [3377, 8778] TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 3377-3766 bp Feature: domain Description: TcpE Location: 3395-3695 bp Feature: domain Description: TcpE Location: 3395-3695 bp Feature: gene Location: 3753-5303 bp Feature: domain Description: AAA_10 Location: 5082-5265 bp Feature: domain Description: AAA_10 Location: 5082 -52 65 bp Feature: gene Location: 6000-7826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6300-6999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6300-6999 bp Feature: gene Location: 7960-8778 bp Feature: domain Description: AAA_10 Location: 7966-8764 bp Feature: domain Description: AAA_10 Location: 7966-8764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), AAA_10 (pfam12846), RVT-GII

Seq: JULU01000191.1 Enterococcus faecium strain 964_EFCM 775_3345_123895, whole genome shotgun sequence (3345 bp)
Overview 1 RT 1: 29-2658 bp Neighborhood of RT #1 [29, 3320] HsdM RVT-AbiP2 Feature: gene Location: 29-1507 bp Feature: domain Description: HsdM Location: 50-1475 bp Feature: domain Description: HsdM Location: 50-1475 bp Feature: gene Location: 1845-3320 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2193-2658 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2193 -2658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2